Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ldb3Q9JKS4 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ldb3Q9JKS4 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ldb3Q9JKS4 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ldb3Q9JKS4 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ldb3Q9JKS4 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ldb3Q9JKS4 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.16□□□□□ -1.9
Ldb3Q9JKS4 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ldb3Q9JKS4 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ldb3Q9JKS4 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Ldb3Q9JKS4 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Ldb3Q9JKS4 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Ldb3Q9JKS4 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Ldb3Q9JKS4 Gm24132-201ENSMUST00000104745 91 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Mir1b-201ENSMUST00000117012 122 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm14775-201ENSMUST00000122089 310 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm13868-201ENSMUST00000122411 294 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm25543-201ENSMUST00000122678 312 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm22225-201ENSMUST00000157358 278 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm27592-201ENSMUST00000157729 126 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm25223-201ENSMUST00000158200 110 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm22174-201ENSMUST00000175050 125 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm22692-201ENSMUST00000175055 125 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm27634-201ENSMUST00000175060 126 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm26460-201ENSMUST00000175061 126 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm22460-201ENSMUST00000175269 124 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm25535-201ENSMUST00000175364 125 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm24365-201ENSMUST00000175384 125 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm44310-201ENSMUST00000175424 126 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm22639-201ENSMUST00000175591 125 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm24979-201ENSMUST00000178626 126 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm27743-201ENSMUST00000185136 126 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm29104-201ENSMUST00000186304 222 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm18341-201ENSMUST00000197538 622 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm25081-201ENSMUST00000082534 108 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Snord35b-201ENSMUST00000082833 87 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm26495-201ENSMUST00000083152 137 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Ldb3Q9JKS4 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm24581-201ENSMUST00000103962 133 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm23990-201ENSMUST00000117031 117 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm11874-201ENSMUST00000117437 130 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm13355-201ENSMUST00000117996 317 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm15936-201ENSMUST00000118706 460 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm13419-201ENSMUST00000121711 271 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm22957-201ENSMUST00000122511 123 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm23584-201ENSMUST00000157655 129 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm23592-201ENSMUST00000157859 117 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Mir6907-201ENSMUST00000183764 71 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm28030-201ENSMUST00000184987 138 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm23370-202ENSMUST00000197008 129 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm20144-201ENSMUST00000203031 165 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm45245-201ENSMUST00000210082 376 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm24356-201ENSMUST00000082859 106 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm22868-201ENSMUST00000083955 164 ntBASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Ldb3Q9JKS4 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Mir466p-201ENSMUST00000103925 89 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Gm14811-201ENSMUST00000117070 117 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Gm23755-201ENSMUST00000157578 343 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Mir1934-201ENSMUST00000158127 83 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Gm27220-201ENSMUST00000183453 262 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Gm28650-201ENSMUST00000188413 411 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Gm2189-201ENSMUST00000201419 429 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 AC157476.1-201ENSMUST00000215555 169 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Mir101b-201ENSMUST00000083622 97 ntBASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ldb3Q9JKS4 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms