Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm23422-201ENSMUST00000102000 107 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Gm14007-201ENSMUST00000118288 210 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Gm11363-201ENSMUST00000121672 548 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Gm23641-201ENSMUST00000157857 101 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Mir6355-201ENSMUST00000183687 106 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Mir6351-201ENSMUST00000183826 99 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Gm18357-201ENSMUST00000188184 580 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.64□□□□□ -2.15
Trem1Q9JKE2 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.64□□□□□ -2.15
Trem1Q9JKE2 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm25421-201ENSMUST00000104218 164 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Mir190b-201ENSMUST00000104803 80 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm14674-201ENSMUST00000117816 342 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm14848-201ENSMUST00000121850 467 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm24480-201ENSMUST00000157442 103 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm24905-201ENSMUST00000158129 104 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm28900-201ENSMUST00000185232 156 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm9402-201ENSMUST00000196849 388 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Gm42578-201ENSMUST00000199960 194 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Trem1Q9JKE2 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.63□□□□□ -2.15
Trem1Q9JKE2 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm24517-201ENSMUST00000122560 107 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm14333-201ENSMUST00000130484 264 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm16218-201ENSMUST00000155424 388 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm24262-201ENSMUST00000157431 144 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm25333-201ENSMUST00000158035 246 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm25066-201ENSMUST00000158145 123 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm21754-201ENSMUST00000177550 479 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm6445-201ENSMUST00000189515 1112 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm37550-201ENSMUST00000193230 463 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Trem1Q9JKE2 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 AC123533.1-201ENSMUST00000227782 446 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm25853-201ENSMUST00000082793 132 ntBASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Trem1Q9JKE2 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm25992-201ENSMUST00000102437 109 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm24889-201ENSMUST00000104388 132 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm15526-201ENSMUST00000112504 204 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm24274-201ENSMUST00000116787 124 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm23718-201ENSMUST00000157350 307 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm23025-201ENSMUST00000158769 111 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm7925-201ENSMUST00000166690 401 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm29550-201ENSMUST00000185543 285 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm28474-201ENSMUST00000188501 315 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm33866-201ENSMUST00000196911 289 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm44990-201ENSMUST00000203922 217 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Trem1Q9JKE2 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm24817-201ENSMUST00000093672 105 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Trem1Q9JKE2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Gm26015-201ENSMUST00000104402 125 ntBASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Gm14678-201ENSMUST00000121396 482 ntBASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Gm22733-201ENSMUST00000158094 91 ntBASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Gm27532-201ENSMUST00000183726 113 ntBASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Gm42960-201ENSMUST00000202160 241 ntBASIC1.6□□□□□ -2.15
Trem1Q9JKE2 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Trem1Q9JKE2 Gm22978-201ENSMUST00000082607 160 ntBASIC1.6□□□□□ -2.15
Trem1Q9JKE2 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm23747-201ENSMUST00000104228 131 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm25876-201ENSMUST00000104329 119 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm13432-201ENSMUST00000118861 241 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm12053-201ENSMUST00000119022 252 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm12639-201ENSMUST00000121400 493 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm12956-201ENSMUST00000122184 414 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm22217-201ENSMUST00000157556 313 ntBASIC1.59□□□□□ -2.15
Trem1Q9JKE2 Gm20477-201ENSMUST00000174028 280 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms