Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Gm24997-201ENSMUST00000157910 105 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm22075-201ENSMUST00000158599 192 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Mir7091-201ENSMUST00000184075 79 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Mir6419-201ENSMUST00000184784 113 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm28196-201ENSMUST00000187719 640 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm44482-201ENSMUST00000199232 103 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.92□□□□□ -2.26
Trem3Q9JKE1 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm37630-201ENSMUST00000194210 1456 ntBASIC0.92□□□□□ -2.26
Trem3Q9JKE1 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm12370-201ENSMUST00000117809 604 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm14126-201ENSMUST00000122345 395 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm24777-201ENSMUST00000157644 107 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm21754-201ENSMUST00000177550 479 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Mir7063-201ENSMUST00000184158 91 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 AC116726.2-201ENSMUST00000217629 986 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm19441-201ENSMUST00000221545 330 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 AC121114.1-201ENSMUST00000228522 570 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Snord14a-201ENSMUST00000082807 87 ntBASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
Trem3Q9JKE1 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.9□□□□□ -2.26
Trem3Q9JKE1 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Gm14554-201ENSMUST00000119548 661 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Gm15861-201ENSMUST00000120979 339 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Gm25325-201ENSMUST00000122559 86 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Gm24885-201ENSMUST00000158783 270 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Gm4076-201ENSMUST00000179230 965 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Gm25873-201ENSMUST00000180317 107 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Mir6388-201ENSMUST00000184417 75 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Gm45382-201ENSMUST00000210607 151 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Trem3Q9JKE1 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm23336-201ENSMUST00000117023 123 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm23032-201ENSMUST00000157995 107 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm23196-201ENSMUST00000158806 107 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Mir6382-201ENSMUST00000184055 110 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm28666-201ENSMUST00000186649 274 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm28437-201ENSMUST00000190277 783 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm43510-201ENSMUST00000197922 353 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm43427-201ENSMUST00000198188 331 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm46136-201ENSMUST00000214730 565 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC0.89□□□□□ -2.27
Trem3Q9JKE1 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Gm381-201ENSMUST00000117443 2037 ntBASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC0.89□□□□□ -2.27
Trem3Q9JKE1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm12636-201ENSMUST00000117395 624 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm12053-201ENSMUST00000119022 252 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm12417-201ENSMUST00000119153 403 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm13588-201ENSMUST00000120026 135 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Defa-ps8-201ENSMUST00000120972 279 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm25294-201ENSMUST00000122791 104 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm25069-201ENSMUST00000175238 86 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm24388-201ENSMUST00000177872 107 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.88□□□□□ -2.27
Trem3Q9JKE1 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm38167-201ENSMUST00000195704 1178 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Igkv13-82-201ENSMUST00000200308 346 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm10297-201ENSMUST00000207136 651 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm44609-201ENSMUST00000207157 460 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 AC168062.2-201ENSMUST00000228907 422 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Mir19a-201ENSMUST00000083482 82 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Mir221-201ENSMUST00000083488 95 ntBASIC0.88□□□□□ -2.27
Trem3Q9JKE1 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Trem3Q9JKE1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Trem3Q9JKE1 Mir301b-201ENSMUST00000102333 97 ntBASIC0.87□□□□□ -2.27
Trem3Q9JKE1 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms