Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm22620-201ENSMUST00000082700 133 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm22806-201ENSMUST00000082738 136 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm25512-201ENSMUST00000083863 107 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm22353-201ENSMUST00000083918 136 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Gm650-201ENSMUST00000144428 1551 ntBASIC2.99□□□□□ -1.93
Trim54Q9ERP3 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim54Q9ERP3 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Mir466k-201ENSMUST00000116774 122 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Mir669i-201ENSMUST00000117007 127 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm12934-201ENSMUST00000119221 343 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm12155-201ENSMUST00000121267 160 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm26256-201ENSMUST00000122499 186 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm24716-201ENSMUST00000157524 104 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm22500-201ENSMUST00000158982 99 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm20718-201ENSMUST00000176058 259 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm20660-201ENSMUST00000177515 289 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm44844-201ENSMUST00000207242 336 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm24623-201ENSMUST00000082616 194 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm22443-201ENSMUST00000082890 107 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Gm26327-201ENSMUST00000093724 111 ntBASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim54Q9ERP3 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm16171-201ENSMUST00000118004 324 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm11798-201ENSMUST00000119150 421 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm24481-201ENSMUST00000157210 102 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm23829-201ENSMUST00000157392 270 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm25486-201ENSMUST00000158726 63 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm28016-201ENSMUST00000184594 196 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm28838-201ENSMUST00000186338 315 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm29635-201ENSMUST00000187221 315 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm29026-201ENSMUST00000187787 315 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm28797-201ENSMUST00000188543 315 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm28855-201ENSMUST00000188680 315 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm28705-201ENSMUST00000189548 315 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm28939-201ENSMUST00000190351 315 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm28223-201ENSMUST00000190469 315 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm29092-201ENSMUST00000190768 315 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm43739-201ENSMUST00000198294 307 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Gm44909-201ENSMUST00000208756 165 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.97□□□□□ -1.93
Trim54Q9ERP3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm22782-201ENSMUST00000104082 132 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm24172-201ENSMUST00000104127 117 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm23963-201ENSMUST00000179603 77 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Mir6370-201ENSMUST00000183510 120 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm20058-201ENSMUST00000186939 284 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm37007-201ENSMUST00000194234 319 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm37404-201ENSMUST00000195726 359 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm44425-201ENSMUST00000203739 429 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Gm45403-201ENSMUST00000209453 276 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Olfr197-201ENSMUST00000080031 926 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Snora23-201ENSMUST00000082517 184 ntBASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Trim54Q9ERP3 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Trim54Q9ERP3 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 91.6 ms