Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 AC159709.1-201ENSMUST00000220445 349 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Lima1Q9ERG0 Gm23951-201ENSMUST00000104029 132 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm22713-201ENSMUST00000116895 130 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm14215-201ENSMUST00000120578 221 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm23048-201ENSMUST00000157237 129 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Mir1942-201ENSMUST00000157274 63 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm22038-201ENSMUST00000157277 242 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm22597-201ENSMUST00000157602 80 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm22389-201ENSMUST00000158193 301 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm25035-201ENSMUST00000175414 77 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Mir7017-201ENSMUST00000184894 62 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm29950-201ENSMUST00000195273 237 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm22508-201ENSMUST00000082772 110 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm24707-201ENSMUST00000082812 107 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm22578-201ENSMUST00000083730 107 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.43□□□□□ -2.18
Lima1Q9ERG0 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm13885-201ENSMUST00000117569 187 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm23206-201ENSMUST00000122720 184 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm24551-201ENSMUST00000158645 92 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm24348-201ENSMUST00000158710 130 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm23196-201ENSMUST00000158806 107 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm24333-201ENSMUST00000175101 84 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm25020-201ENSMUST00000178071 107 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm21737-201ENSMUST00000178112 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm21729-201ENSMUST00000180058 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm21853-201ENSMUST00000180071 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm20901-201ENSMUST00000180177 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Mir7062-201ENSMUST00000185038 66 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm29550-201ENSMUST00000185543 285 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm29073-201ENSMUST00000185563 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm29495-201ENSMUST00000189319 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm28090-201ENSMUST00000189458 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm21647-201ENSMUST00000189755 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm29165-201ENSMUST00000190655 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm29211-201ENSMUST00000191470 664 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm36891-201ENSMUST00000191995 655 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Ighv1-32-201ENSMUST00000195149 351 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.42□□□□□ -2.18
Lima1Q9ERG0 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm16976-205ENSMUST00000227324 226 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm26265-201ENSMUST00000083277 135 ntBASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Lima1Q9ERG0 Gm25541-201ENSMUST00000116888 126 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm14007-201ENSMUST00000118288 210 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm12372-201ENSMUST00000121654 768 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm14765-201ENSMUST00000121954 326 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm6568-201ENSMUST00000122274 697 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm13368-201ENSMUST00000122443 430 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm25784-201ENSMUST00000122524 81 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm15914-201ENSMUST00000161922 309 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Zfp950-206ENSMUST00000178819 171 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm22633-201ENSMUST00000179834 107 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm27028-201ENSMUST00000182303 399 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm42475-201ENSMUST00000201212 295 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm10297-201ENSMUST00000207136 651 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Lima1Q9ERG0 Mir687-201ENSMUST00000102166 89 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Gm23202-201ENSMUST00000104376 129 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Gm22678-201ENSMUST00000116974 101 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Gm26173-201ENSMUST00000158416 136 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Gm18396-201ENSMUST00000177095 361 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Gm22862-201ENSMUST00000178593 121 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Gm21978-201ENSMUST00000179696 377 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Mir6341-201ENSMUST00000183490 121 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Gm37946-201ENSMUST00000192064 347 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 Gm45382-201ENSMUST00000210607 151 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.4□□□□□ -2.19
Lima1Q9ERG0 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 152.1 ms