Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm23446-201ENSMUST00000177977 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm22583-201ENSMUST00000178031 107 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm26201-201ENSMUST00000178047 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm24711-201ENSMUST00000178062 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm24609-201ENSMUST00000178166 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm23265-201ENSMUST00000178321 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm22812-201ENSMUST00000178329 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm26246-201ENSMUST00000178388 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm25155-201ENSMUST00000178450 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm24760-201ENSMUST00000178530 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm22285-201ENSMUST00000178576 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm22417-201ENSMUST00000178656 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm26270-201ENSMUST00000178690 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm24168-201ENSMUST00000178825 107 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm23313-201ENSMUST00000178931 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm23089-201ENSMUST00000178947 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm24153-201ENSMUST00000179280 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm25597-201ENSMUST00000179388 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm25816-201ENSMUST00000179764 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm26188-201ENSMUST00000179963 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm26433-201ENSMUST00000180227 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm22128-201ENSMUST00000180346 94 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm44555-201ENSMUST00000209008 148 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm22229-201ENSMUST00000082987 108 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm25859-201ENSMUST00000083710 91 ntBASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Scn4aQ9ER60 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Gm25624-201ENSMUST00000157222 275 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Gm22633-201ENSMUST00000179834 107 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Gm20058-201ENSMUST00000186939 284 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Gm28299-201ENSMUST00000189908 339 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Gm37727-201ENSMUST00000191637 819 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC2.23□□□□□ -2.05
Scn4aQ9ER60 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Scn4aQ9ER60 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Scn4aQ9ER60 Gm7164-201ENSMUST00000117503 450 ntBASIC2.22□□□□□ -2.05
Scn4aQ9ER60 Gm11358-201ENSMUST00000122310 373 ntBASIC2.22□□□□□ -2.05
Scn4aQ9ER60 Gm15878-201ENSMUST00000127561 306 ntBASIC2.22□□□□□ -2.05
Scn4aQ9ER60 Gm24174-201ENSMUST00000158933 111 ntBASIC2.22□□□□□ -2.05
Scn4aQ9ER60 Gm25243-201ENSMUST00000174912 207 ntBASIC2.22□□□□□ -2.05
Scn4aQ9ER60 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Scn4aQ9ER60 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.22□□□□□ -2.05
Scn4aQ9ER60 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Scn4aQ9ER60 Mir1192-201ENSMUST00000116976 121 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Gm15175-201ENSMUST00000117629 132 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Gm14770-201ENSMUST00000122197 312 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Gm3104-201ENSMUST00000171004 473 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Gm8532-201ENSMUST00000179174 461 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Gm25361-201ENSMUST00000179358 76 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Gm43007-201ENSMUST00000197618 291 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Gm18774-201ENSMUST00000218269 601 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Gm24035-201ENSMUST00000082867 107 ntBASIC2.21□□□□□ -2.05
Scn4aQ9ER60 Gm26474-201ENSMUST00000116762 122 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm5287-201ENSMUST00000120666 598 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm12926-201ENSMUST00000121158 409 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm14366-201ENSMUST00000121970 730 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm26256-201ENSMUST00000122499 186 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm27817-201ENSMUST00000184302 233 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm28648-201ENSMUST00000190092 343 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm17771-201ENSMUST00000194477 1147 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm43193-201ENSMUST00000197732 441 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.21□□□□□ -2.06
Scn4aQ9ER60 Gm25876-201ENSMUST00000104329 119 ntBASIC2.2□□□□□ -2.06
Scn4aQ9ER60 Gm15211-201ENSMUST00000118932 528 ntBASIC2.2□□□□□ -2.06
Scn4aQ9ER60 Gm23586-201ENSMUST00000157657 123 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms