Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Gm43171-201ENSMUST00000199882 291 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 AC159380.1-201ENSMUST00000218096 121 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 AC154636.3-201ENSMUST00000221489 1214 ntBASIC0.45□□□□□ -2.34
Cpsf1Q9EPU4 Gm24793-201ENSMUST00000104289 132 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Gm26275-201ENSMUST00000157101 268 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Gm22755-201ENSMUST00000157143 100 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Gm18397-201ENSMUST00000176704 587 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Gm29005-201ENSMUST00000186773 320 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Gm43142-201ENSMUST00000198670 361 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Gm42807-201ENSMUST00000200141 329 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Gm43124-201ENSMUST00000201878 278 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Gm26206-201ENSMUST00000082908 110 ntBASIC0.44□□□□□ -2.34
Cpsf1Q9EPU4 Mir710-201ENSMUST00000102088 110 ntBASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 Gm25097-201ENSMUST00000104042 145 ntBASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 Gm13356-201ENSMUST00000121678 335 ntBASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 Gm27599-201ENSMUST00000183758 174 ntBASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 Gm27878-201ENSMUST00000184000 106 ntBASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 Gm34139-201ENSMUST00000196166 294 ntBASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 AC167140.1-201ENSMUST00000224710 403 ntBASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 Gm24917-201ENSMUST00000083935 104 ntBASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.43□□□□□ -2.34
Cpsf1Q9EPU4 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Gm14774-201ENSMUST00000117857 536 ntBASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Mup-ps15-201ENSMUST00000121741 539 ntBASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Gm26152-201ENSMUST00000157427 101 ntBASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Gm23020-201ENSMUST00000158766 253 ntBASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Gm3027-201ENSMUST00000167579 451 ntBASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Gm43407-201ENSMUST00000199816 317 ntBASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Gm10264-201ENSMUST00000220589 429 ntBASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
Cpsf1Q9EPU4 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 Gm26256-201ENSMUST00000122499 186 ntBASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 Gm22769-201ENSMUST00000158367 98 ntBASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 Gm24221-201ENSMUST00000158833 313 ntBASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 Gm20698-201ENSMUST00000175657 233 ntBASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 Mir6338-201ENSMUST00000183389 109 ntBASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 Gm28191-201ENSMUST00000189112 211 ntBASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.41□□□□□ -2.34
Cpsf1Q9EPU4 Gm25423-201ENSMUST00000157609 107 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 Gm27660-201ENSMUST00000184028 208 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 Trbv24-201ENSMUST00000194614 347 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 Gm42570-201ENSMUST00000195937 292 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 Gm44055-201ENSMUST00000204376 247 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 Gm25128-201ENSMUST00000083339 76 ntBASIC0.4□□□□□ -2.34
Cpsf1Q9EPU4 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Cpsf1Q9EPU4 Mdga2-203ENSMUST00000113942 423 ntBASIC0.39□□□□□ -2.35
Cpsf1Q9EPU4 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.39□□□□□ -2.35
Cpsf1Q9EPU4 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Cpsf1Q9EPU4 Gm27517-201ENSMUST00000184347 236 ntBASIC0.39□□□□□ -2.35
Cpsf1Q9EPU4 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Cpsf1Q9EPU4 Gm22477-201ENSMUST00000122569 316 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm22233-201ENSMUST00000157464 114 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm25868-201ENSMUST00000158253 114 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm29288-201ENSMUST00000191582 901 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Snord96a-201ENSMUST00000082791 81 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm14945-201ENSMUST00000119556 1118 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm23332-201ENSMUST00000157424 275 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm8161-201ENSMUST00000168739 481 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm25525-201ENSMUST00000177701 107 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm22995-201ENSMUST00000179670 107 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm25672-201ENSMUST00000180111 107 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm37193-201ENSMUST00000193087 513 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm25138-201ENSMUST00000083248 136 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm22971-201ENSMUST00000083305 97 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm23520-201ENSMUST00000093736 107 ntBASIC0.38□□□□□ -2.35
Cpsf1Q9EPU4 Gm24716-201ENSMUST00000157524 104 ntBASIC0.37□□□□□ -2.35
Cpsf1Q9EPU4 Gm25838-201ENSMUST00000158920 120 ntBASIC0.37□□□□□ -2.35
Cpsf1Q9EPU4 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC0.37□□□□□ -2.35
Cpsf1Q9EPU4 Gm29460-201ENSMUST00000188607 714 ntBASIC0.37□□□□□ -2.35
Cpsf1Q9EPU4 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.37□□□□□ -2.35
Cpsf1Q9EPU4 Gm10092-201ENSMUST00000077110 180 ntBASIC0.37□□□□□ -2.35
Cpsf1Q9EPU4 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Cpsf1Q9EPU4 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
Cpsf1Q9EPU4 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.36□□□□□ -2.35
Cpsf1Q9EPU4 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.36□□□□□ -2.35
Cpsf1Q9EPU4 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms