Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.03□□□□□ -1.77
Upf1Q9EPU0 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Gm13419-201ENSMUST00000121711 271 ntBASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Gm11414-201ENSMUST00000121795 263 ntBASIC4.02□□□□□ -1.77
Upf1Q9EPU0 n-R5s87-201ENSMUST00000122752 116 ntBASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Gm22034-201ENSMUST00000157283 134 ntBASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
Upf1Q9EPU0 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC4.02□□□□□ -1.77
Upf1Q9EPU0 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm26500-201ENSMUST00000101867 106 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm13831-201ENSMUST00000118764 302 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm14649-201ENSMUST00000121814 324 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm26186-201ENSMUST00000157689 125 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm26187-201ENSMUST00000157693 101 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Mir5136-201ENSMUST00000175573 76 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm27869-201ENSMUST00000184327 122 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm40810-201ENSMUST00000219149 253 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm25202-201ENSMUST00000082838 191 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Upf1Q9EPU0 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
Upf1Q9EPU0 Gm42909-201ENSMUST00000196982 3619 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upf1Q9EPU0 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC4□□□□□ -1.77
Upf1Q9EPU0 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Upf1Q9EPU0 Gm22560-201ENSMUST00000157332 120 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Gm28848-201ENSMUST00000189984 168 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4□□□□□ -1.77
Upf1Q9EPU0 Gm37089-201ENSMUST00000195616 129 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Gm38088-201ENSMUST00000195829 241 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Gm25820-201ENSMUST00000198589 127 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Gm43978-201ENSMUST00000203491 451 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Gm46138-201ENSMUST00000215294 426 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Gm37296-201ENSMUST00000192728 2922 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4□□□□□ -1.77
Upf1Q9EPU0 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Upf1Q9EPU0 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Gm13714-201ENSMUST00000117313 221 ntBASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Gm12934-201ENSMUST00000119221 343 ntBASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Gm23901-201ENSMUST00000157570 107 ntBASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Gm24152-201ENSMUST00000082764 163 ntBASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Snord14d-201ENSMUST00000083424 86 ntBASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Gm23850-201ENSMUST00000083830 169 ntBASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upf1Q9EPU0 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
Upf1Q9EPU0 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm23256-201ENSMUST00000102235 110 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm23060-201ENSMUST00000102345 109 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm15714-201ENSMUST00000117168 250 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm23331-201ENSMUST00000157423 108 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm26024-201ENSMUST00000158657 322 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm8292-201ENSMUST00000162574 396 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm17159-201ENSMUST00000169043 482 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm7958-201ENSMUST00000178255 468 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm7950-201ENSMUST00000179633 468 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm27921-201ENSMUST00000183968 108 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm44337-201ENSMUST00000196553 114 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm23453-201ENSMUST00000083326 106 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.98□□□□□ -1.77
Upf1Q9EPU0 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Upf1Q9EPU0 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm22782-201ENSMUST00000104082 132 ntBASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm14714-201ENSMUST00000119743 439 ntBASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm22984-201ENSMUST00000122751 122 ntBASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm22500-201ENSMUST00000158982 99 ntBASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm29262-201ENSMUST00000190084 196 ntBASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm23727-201ENSMUST00000083352 164 ntBASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm23731-201ENSMUST00000083749 107 ntBASIC3.97□□□□□ -1.77
Upf1Q9EPU0 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms