Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm15162-201ENSMUST00000119325 283 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm6568-201ENSMUST00000122274 697 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm22038-201ENSMUST00000157277 242 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm24394-201ENSMUST00000158141 123 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Cdc40Q9DC48 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Mir7021-201ENSMUST00000197026 63 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm17906-201ENSMUST00000202480 901 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm26263-201ENSMUST00000083281 164 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm381-201ENSMUST00000117443 2037 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.72□□□□□ -2.13
Cdc40Q9DC48 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Mir687-201ENSMUST00000102166 89 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Gm22793-201ENSMUST00000157227 330 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Gm23196-201ENSMUST00000158806 107 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Gm20689-201ENSMUST00000176033 279 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Gm21885-201ENSMUST00000178891 327 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Mir7225-201ENSMUST00000184178 54 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Mir7678-201ENSMUST00000185076 71 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Gm43427-201ENSMUST00000198188 331 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Snord43-201ENSMUST00000199549 108 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.71□□□□□ -2.14
Cdc40Q9DC48 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Gm22229-201ENSMUST00000082987 108 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Gm23246-201ENSMUST00000083371 67 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Mir107-201ENSMUST00000083660 87 ntBASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.71□□□□□ -2.14
Cdc40Q9DC48 Gm22831-201ENSMUST00000102473 109 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm24984-201ENSMUST00000104454 133 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm23184-201ENSMUST00000122594 131 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm24241-201ENSMUST00000157787 145 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm25994-201ENSMUST00000175392 101 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm25020-201ENSMUST00000178071 107 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Mir3068-202ENSMUST00000197755 79 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm42857-201ENSMUST00000200823 339 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm45658-201ENSMUST00000209197 580 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm26228-201ENSMUST00000082512 107 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm25080-201ENSMUST00000082526 107 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm26922-201ENSMUST00000082687 72 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm25518-201ENSMUST00000083864 107 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Snora33-201ENSMUST00000093556 129 ntBASIC1.7□□□□□ -2.14
Cdc40Q9DC48 Gm23202-201ENSMUST00000104376 129 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Gm12393-201ENSMUST00000117084 848 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Gm13804-201ENSMUST00000119552 172 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Gm25413-201ENSMUST00000158544 312 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Gm22076-201ENSMUST00000158601 84 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Gm23448-201ENSMUST00000083151 104 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Mir151-201ENSMUST00000083678 68 ntBASIC1.69□□□□□ -2.14
Cdc40Q9DC48 Gm25938-201ENSMUST00000104139 166 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm25421-201ENSMUST00000104218 164 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm11786-201ENSMUST00000120799 155 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm12779-201ENSMUST00000121496 143 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm25325-201ENSMUST00000122559 86 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm25051-201ENSMUST00000158602 249 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm7592-201ENSMUST00000160674 627 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm24315-201ENSMUST00000177835 127 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm21978-201ENSMUST00000179696 377 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm26864-201ENSMUST00000181346 156 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Mir6379-201ENSMUST00000183392 115 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm27544-201ENSMUST00000185069 155 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm43510-201ENSMUST00000197922 353 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 AC153957.1-201ENSMUST00000215235 229 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm26328-201ENSMUST00000082821 107 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Gm25794-201ENSMUST00000083286 107 ntBASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Cdc40Q9DC48 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms