Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Mir29c-201ENSMUST00000083614 88 ntBASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ccdc3Q9D6Y1 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Gm16129-201ENSMUST00000152628 486 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Mir3968-201ENSMUST00000175355 100 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22584-201ENSMUST00000177935 92 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Gm27878-201ENSMUST00000184000 106 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 AC112935.1-201ENSMUST00000227603 250 ntBASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
Ccdc3Q9D6Y1 Gm19428-201ENSMUST00000220512 1995 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23202-201ENSMUST00000104376 129 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm15526-201ENSMUST00000112504 204 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm12393-201ENSMUST00000117084 848 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm15175-201ENSMUST00000117629 132 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm14215-201ENSMUST00000120578 221 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm26049-201ENSMUST00000157313 108 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23718-201ENSMUST00000157350 307 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22290-201ENSMUST00000177655 107 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22583-201ENSMUST00000178031 107 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm21978-201ENSMUST00000179696 377 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm24464-201ENSMUST00000179697 107 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Mir6399-201ENSMUST00000184050 84 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28200-201ENSMUST00000187778 315 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm29378-201ENSMUST00000188723 315 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28909-201ENSMUST00000189406 315 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28299-201ENSMUST00000189908 339 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Gm10297-201ENSMUST00000207136 651 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 AC091260.1-201ENSMUST00000216112 229 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Ccdc3Q9D6Y1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm11849-201ENSMUST00000121293 261 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm6568-201ENSMUST00000122274 697 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23172-201ENSMUST00000157160 124 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22963-201ENSMUST00000157960 91 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm26271-201ENSMUST00000158349 104 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23181-201ENSMUST00000158685 110 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28560-201ENSMUST00000186091 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28334-201ENSMUST00000186653 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28495-201ENSMUST00000188452 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28232-201ENSMUST00000188683 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28481-201ENSMUST00000189231 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm29059-201ENSMUST00000191534 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm37765-201ENSMUST00000192395 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm37237-201ENSMUST00000192893 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm36968-201ENSMUST00000193737 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm38290-201ENSMUST00000195238 315 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm42805-201ENSMUST00000196158 276 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm33866-201ENSMUST00000196911 289 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm45590-201ENSMUST00000209715 262 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm18160-201ENSMUST00000214279 827 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Gm26446-201ENSMUST00000082455 103 ntBASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
Ccdc3Q9D6Y1 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm13885-201ENSMUST00000117569 187 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm13409-201ENSMUST00000122072 546 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm25325-201ENSMUST00000122559 86 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm22315-201ENSMUST00000158010 143 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23068-201ENSMUST00000158239 293 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm23196-201ENSMUST00000158806 107 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Mir3086-201ENSMUST00000175072 87 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Mir3098-201ENSMUST00000175416 87 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm27493-201ENSMUST00000184128 78 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Mir6240-201ENSMUST00000184281 117 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm27588-201ENSMUST00000185096 263 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm28453-203ENSMUST00000187041 189 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Gm45365-201ENSMUST00000209489 256 ntBASIC1.41□□□□□ -2.18
Ccdc3Q9D6Y1 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms