Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm13378-201ENSMUST00000117483 336 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Gm13581-201ENSMUST00000120675 278 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Gm16355-201ENSMUST00000128606 231 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Gm24481-201ENSMUST00000157210 102 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Gm26194-201ENSMUST00000175036 71 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Gm43264-201ENSMUST00000202284 325 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Gm17990-201ENSMUST00000211728 553 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Gm22622-201ENSMUST00000082870 129 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.64□□□□□ -1.99
Vps28Q9D1C8 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm14287-201ENSMUST00000121060 117 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm14530-201ENSMUST00000122391 333 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm25945-201ENSMUST00000122484 135 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm25384-201ENSMUST00000157807 105 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm25454-201ENSMUST00000157947 315 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm24922-201ENSMUST00000158511 102 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Mir5101-201ENSMUST00000175181 83 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm37353-201ENSMUST00000194497 313 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm34073-201ENSMUST00000195736 212 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm43739-201ENSMUST00000198294 307 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm45375-201ENSMUST00000210338 280 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gm45879-201ENSMUST00000212521 392 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Vps28Q9D1C8 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm14579-201ENSMUST00000117068 283 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm12443-201ENSMUST00000122308 323 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm2830-201ENSMUST00000140330 385 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm23169-201ENSMUST00000157157 112 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm26411-201ENSMUST00000157668 107 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm24436-201ENSMUST00000157889 302 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm27588-201ENSMUST00000185096 263 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm44555-201ENSMUST00000209008 148 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.62□□□□□ -1.99
Vps28Q9D1C8 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm6574-201ENSMUST00000120037 362 ntBASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm23331-201ENSMUST00000157423 108 ntBASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm19694-201ENSMUST00000192364 505 ntBASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm18453-201ENSMUST00000208000 626 ntBASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm45730-201ENSMUST00000212560 395 ntBASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.61□□□□□ -1.99
Vps28Q9D1C8 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm25207-201ENSMUST00000093745 107 ntBASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Vps28Q9D1C8 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Gm24670-201ENSMUST00000104154 132 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Snora36b-201ENSMUST00000104383 132 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Gm22486-201ENSMUST00000116815 137 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Gm22151-201ENSMUST00000116963 58 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Gm13457-201ENSMUST00000117885 267 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Gm28169-201ENSMUST00000190342 345 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Trbv6-201ENSMUST00000193743 276 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Gm26494-201ENSMUST00000083154 143 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Gm24493-201ENSMUST00000083805 143 ntBASIC2.6□□□□□ -1.99
Vps28Q9D1C8 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms