Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
Ddx56Q9D0R4 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm14602-201ENSMUST00000118625 340 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm12793-201ENSMUST00000119268 292 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm12304-201ENSMUST00000120312 385 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm15190-201ENSMUST00000120855 276 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm23791-201ENSMUST00000122553 293 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm24213-201ENSMUST00000158255 258 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm22192-201ENSMUST00000175128 85 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm9830-201ENSMUST00000178509 357 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm29602-201ENSMUST00000186887 442 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Trav15d-3-201ENSMUST00000198604 167 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm44083-201ENSMUST00000203114 337 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm44478-201ENSMUST00000204875 114 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm44858-201ENSMUST00000207360 154 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 CT030166.2-201ENSMUST00000222021 368 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm25632-201ENSMUST00000083112 85 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm26314-201ENSMUST00000083891 107 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx56Q9D0R4 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Mir693-201ENSMUST00000102187 89 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm5396-201ENSMUST00000121222 532 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm23667-201ENSMUST00000157466 120 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm23380-201ENSMUST00000158448 103 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm24487-201ENSMUST00000178017 63 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm29104-201ENSMUST00000186304 222 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm28848-201ENSMUST00000189984 168 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm36776-201ENSMUST00000207006 203 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm18991-201ENSMUST00000209225 746 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx56Q9D0R4 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
Ddx56Q9D0R4 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Gm24118-201ENSMUST00000103972 126 ntBASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Gm22956-201ENSMUST00000122520 80 ntBASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Gm23921-201ENSMUST00000175258 107 ntBASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Gm37085-201ENSMUST00000193780 196 ntBASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Gm6030-201ENSMUST00000078768 402 ntBASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
Ddx56Q9D0R4 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm22316-201ENSMUST00000158012 216 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm24553-201ENSMUST00000158653 131 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm25476-201ENSMUST00000175125 185 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm20672-201ENSMUST00000176605 261 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm21893-201ENSMUST00000179119 397 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm20257-202ENSMUST00000188643 130 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm43914-201ENSMUST00000203592 594 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm45207-201ENSMUST00000207469 145 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm9174-201ENSMUST00000078149 255 ntBASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Ddx56Q9D0R4 Gm12954-201ENSMUST00000118610 611 ntBASIC3.25□□□□□ -1.89
Ddx56Q9D0R4 Gm12785-201ENSMUST00000122052 172 ntBASIC3.25□□□□□ -1.89
Ddx56Q9D0R4 Gm24726-201ENSMUST00000158232 121 ntBASIC3.25□□□□□ -1.89
Ddx56Q9D0R4 Gm23262-201ENSMUST00000158323 168 ntBASIC3.25□□□□□ -1.89
Ddx56Q9D0R4 Gm24388-201ENSMUST00000177872 107 ntBASIC3.25□□□□□ -1.89
Ddx56Q9D0R4 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.25□□□□□ -1.89
Ddx56Q9D0R4 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms