Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm24481-201ENSMUST00000157210 102 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm24908-201ENSMUST00000157294 127 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm24716-201ENSMUST00000157524 104 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm22330-201ENSMUST00000158068 115 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm27510-201ENSMUST00000158214 64 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm8580-201ENSMUST00000160295 464 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Mir3965-201ENSMUST00000175570 69 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm6801-201ENSMUST00000190697 339 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm43238-201ENSMUST00000196463 359 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm45119-201ENSMUST00000207612 199 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm45704-201ENSMUST00000212582 403 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm30534-201ENSMUST00000217928 207 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 AC154245.1-201ENSMUST00000224615 601 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 AC158981.3-202ENSMUST00000228906 523 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Ddx28Q9CWT6 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm11598-201ENSMUST00000119257 357 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm14574-201ENSMUST00000120644 279 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm26099-201ENSMUST00000157248 109 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm3027-201ENSMUST00000167579 451 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Mir7242-201ENSMUST00000183710 79 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm45815-201ENSMUST00000220241 146 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm25801-201ENSMUST00000082638 106 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm26066-201ENSMUST00000083385 109 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm24765-201ENSMUST00000083691 103 ntBASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ddx28Q9CWT6 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm24126-201ENSMUST00000104111 106 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm11460-201ENSMUST00000118200 361 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm24958-201ENSMUST00000158009 97 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm17166-201ENSMUST00000172006 431 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm6060-201ENSMUST00000188671 251 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm44844-201ENSMUST00000207242 336 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm45315-201ENSMUST00000209283 333 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm45375-201ENSMUST00000210338 280 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm33654-201ENSMUST00000221704 215 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm21937-201ENSMUST00000222825 218 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm23404-201ENSMUST00000082543 97 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm26457-201ENSMUST00000082678 78 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.47□□□□□ -2.01
Ddx28Q9CWT6 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
Ddx28Q9CWT6 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Mir669l-201ENSMUST00000103771 98 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm25407-201ENSMUST00000104102 134 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm15846-201ENSMUST00000116022 320 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm26102-201ENSMUST00000157251 284 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm22141-201ENSMUST00000157403 277 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm24601-201ENSMUST00000157970 143 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm24879-201ENSMUST00000158386 143 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm24681-201ENSMUST00000158760 107 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm8292-201ENSMUST00000162574 396 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm24085-201ENSMUST00000175172 116 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm28740-201ENSMUST00000186142 215 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm43510-201ENSMUST00000197922 353 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm43505-201ENSMUST00000200579 139 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Gm44555-201ENSMUST00000209008 148 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ddx28Q9CWT6 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm24280-201ENSMUST00000104237 134 ntBASIC2.45□□□□□ -2.02
Ddx28Q9CWT6 Gm14670-201ENSMUST00000117327 337 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms