Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.36□□□□□ -2.03
Smc1aQ9CU62 Mir687-201ENSMUST00000102166 89 ntBASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm24901-201ENSMUST00000158125 110 ntBASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm23022-201ENSMUST00000158768 180 ntBASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm43865-201ENSMUST00000204721 127 ntBASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm45150-201ENSMUST00000206051 467 ntBASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm19032-201ENSMUST00000208584 592 ntBASIC2.35□□□□□ -2.03
Smc1aQ9CU62 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.35□□□□□ -2.03
Smc1aQ9CU62 AC153526.1-201ENSMUST00000219750 190 ntBASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Gm22806-201ENSMUST00000082738 136 ntBASIC2.35□□□□□ -2.03
Smc1aQ9CU62 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Smc1aQ9CU62 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm12646-201ENSMUST00000119144 238 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm23196-201ENSMUST00000158806 107 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm15914-201ENSMUST00000161922 309 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm24518-201ENSMUST00000180275 94 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm37550-201ENSMUST00000193230 463 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm44142-201ENSMUST00000203358 311 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.34□□□□□ -2.03
Smc1aQ9CU62 AC159203.2-201ENSMUST00000221326 193 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm24045-201ENSMUST00000083113 98 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Mir30d-201ENSMUST00000083503 82 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Mir452-201ENSMUST00000093629 85 ntBASIC2.34□□□□□ -2.03
Smc1aQ9CU62 Gm13378-201ENSMUST00000117483 336 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm23752-201ENSMUST00000157584 115 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm27396-201ENSMUST00000157708 58 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm24010-201ENSMUST00000157731 282 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm22192-201ENSMUST00000175128 85 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm24168-201ENSMUST00000178825 107 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm28343-201ENSMUST00000185386 112 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm43083-201ENSMUST00000199594 476 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm44083-201ENSMUST00000203114 337 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Smc1aQ9CU62 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 AC129208.2-201ENSMUST00000228506 320 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm25632-201ENSMUST00000083112 85 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Gm25859-201ENSMUST00000083710 91 ntBASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Smc1aQ9CU62 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm23429-201ENSMUST00000122486 149 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm25325-201ENSMUST00000122559 86 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm25339-201ENSMUST00000157458 232 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm24997-201ENSMUST00000157910 105 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm24551-201ENSMUST00000158645 92 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm25243-201ENSMUST00000174912 207 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm8532-201ENSMUST00000179174 461 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm26652-202ENSMUST00000181672 475 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Ighv12-1-201ENSMUST00000195542 329 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm3724-201ENSMUST00000197957 349 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm18774-201ENSMUST00000218269 601 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.32□□□□□ -2.04
Smc1aQ9CU62 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm19441-201ENSMUST00000221545 330 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 CT010480.5-201ENSMUST00000225026 217 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm26263-201ENSMUST00000083281 164 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Smc1aQ9CU62 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.32□□□□□ -2.04
Smc1aQ9CU62 Gm14405-201ENSMUST00000117808 2330 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm22494-201ENSMUST00000104495 128 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm6444-201ENSMUST00000119611 458 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm22555-201ENSMUST00000157801 62 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm20543-201ENSMUST00000174200 726 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm9022-202ENSMUST00000183285 483 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm8151-201ENSMUST00000184817 871 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Smc1aQ9CU62 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 AC110380.1-201ENSMUST00000226987 389 ntBASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Smc1aQ9CU62 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms