Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm25376-201ENSMUST00000104340 133 ntBASIC1.6□□□□□ -2.15
Use1Q9CQ56 Gm26342-201ENSMUST00000104557 129 ntBASIC1.6□□□□□ -2.15
Use1Q9CQ56 Gm16218-201ENSMUST00000155424 388 ntBASIC1.6□□□□□ -2.15
Use1Q9CQ56 Gm24358-201ENSMUST00000158424 288 ntBASIC1.6□□□□□ -2.15
Use1Q9CQ56 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.6□□□□□ -2.15
Use1Q9CQ56 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.6□□□□□ -2.15
Use1Q9CQ56 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.6□□□□□ -2.15
Use1Q9CQ56 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Use1Q9CQ56 Gm22229-201ENSMUST00000082987 108 ntBASIC1.6□□□□□ -2.15
Use1Q9CQ56 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Use1Q9CQ56 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.6□□□□□ -2.15
Use1Q9CQ56 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.59□□□□□ -2.15
Use1Q9CQ56 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Use1Q9CQ56 Gm12370-201ENSMUST00000117809 604 ntBASIC1.59□□□□□ -2.15
Use1Q9CQ56 Gm14638-201ENSMUST00000121338 216 ntBASIC1.59□□□□□ -2.15
Use1Q9CQ56 Gm7837-201ENSMUST00000190873 412 ntBASIC1.59□□□□□ -2.15
Use1Q9CQ56 Gm43583-201ENSMUST00000199235 303 ntBASIC1.59□□□□□ -2.15
Use1Q9CQ56 Gm45365-201ENSMUST00000209489 256 ntBASIC1.59□□□□□ -2.15
Use1Q9CQ56 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC1.59□□□□□ -2.15
Use1Q9CQ56 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.59□□□□□ -2.15
Use1Q9CQ56 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.59□□□□□ -2.15
Use1Q9CQ56 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.59□□□□□ -2.15
Use1Q9CQ56 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.59□□□□□ -2.15
Use1Q9CQ56 Gm22997-201ENSMUST00000082845 107 ntBASIC1.59□□□□□ -2.15
Use1Q9CQ56 Gm24490-201ENSMUST00000083803 98 ntBASIC1.59□□□□□ -2.15
Use1Q9CQ56 Gm22831-201ENSMUST00000102473 109 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm8858-201ENSMUST00000118259 342 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm23983-201ENSMUST00000157142 114 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm22768-201ENSMUST00000158366 153 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Use1Q9CQ56 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm27659-201ENSMUST00000183472 98 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm37081-201ENSMUST00000192034 196 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm43578-201ENSMUST00000201250 459 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.58□□□□□ -2.16
Use1Q9CQ56 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.58□□□□□ -2.16
Use1Q9CQ56 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm22299-201ENSMUST00000082663 136 ntBASIC1.58□□□□□ -2.16
Use1Q9CQ56 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Use1Q9CQ56 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Use1Q9CQ56 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Use1Q9CQ56 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Use1Q9CQ56 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm14624-201ENSMUST00000117746 192 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm7916-201ENSMUST00000120325 456 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm13433-201ENSMUST00000121701 240 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm11471-201ENSMUST00000121824 198 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm13409-201ENSMUST00000122072 546 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm14402-201ENSMUST00000122217 508 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm15077-201ENSMUST00000122344 362 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm25279-201ENSMUST00000122608 133 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm23111-201ENSMUST00000122652 105 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm25115-201ENSMUST00000157187 140 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm24419-201ENSMUST00000157875 332 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm24768-201ENSMUST00000158512 94 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm24885-201ENSMUST00000158783 270 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm23548-201ENSMUST00000158963 106 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm25642-201ENSMUST00000175137 66 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm25035-201ENSMUST00000175414 77 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm23269-201ENSMUST00000178701 107 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Mir3961-201ENSMUST00000198795 59 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm44482-201ENSMUST00000199232 103 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm42960-201ENSMUST00000202160 241 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm17990-201ENSMUST00000211728 553 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Use1Q9CQ56 Mir429-201ENSMUST00000083493 83 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.57□□□□□ -2.16
Use1Q9CQ56 Gm14007-201ENSMUST00000118288 210 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Gm14678-201ENSMUST00000121396 482 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Gm23718-201ENSMUST00000157350 307 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Gm24780-201ENSMUST00000157635 143 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Mir3092-201ENSMUST00000174954 96 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Zfp950-206ENSMUST00000178819 171 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Gm21894-201ENSMUST00000179631 546 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Use1Q9CQ56 Gm37438-201ENSMUST00000192813 393 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Gm33866-201ENSMUST00000196911 289 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Use1Q9CQ56 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Hmgb1l-201ENSMUST00000082150 571 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Gm23100-201ENSMUST00000083455 141 ntBASIC1.56□□□□□ -2.16
Use1Q9CQ56 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Use1Q9CQ56 Mir223-201ENSMUST00000102112 110 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm12372-201ENSMUST00000121654 768 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm23981-201ENSMUST00000157136 106 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm23043-201ENSMUST00000157890 109 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm22731-201ENSMUST00000158086 94 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm22665-201ENSMUST00000158720 275 ntBASIC1.55□□□□□ -2.16
Use1Q9CQ56 Gm25162-201ENSMUST00000158906 159 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms