Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm15936-201ENSMUST00000118706 460 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm12926-201ENSMUST00000121158 409 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm22816-201ENSMUST00000157450 117 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm23641-201ENSMUST00000157857 101 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm22726-201ENSMUST00000158089 179 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm23260-201ENSMUST00000158317 172 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm25605-201ENSMUST00000158364 124 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm24926-201ENSMUST00000178053 79 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm22632-201ENSMUST00000178266 79 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm5829-201ENSMUST00000191383 351 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm17951-201ENSMUST00000198536 496 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim11Q99PQ2 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim11Q99PQ2 AC140254.1-201ENSMUST00000220063 331 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm25257-201ENSMUST00000083907 110 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim11Q99PQ2 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim11Q99PQ2 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim11Q99PQ2 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm23271-201ENSMUST00000104052 124 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm24282-201ENSMUST00000104232 66 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm22139-201ENSMUST00000158747 105 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm23365-201ENSMUST00000175019 125 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm25960-201ENSMUST00000175110 125 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm44453-201ENSMUST00000175161 126 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm25195-201ENSMUST00000177656 126 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm26200-201ENSMUST00000180273 79 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm27308-201ENSMUST00000184807 233 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm7449-201ENSMUST00000194393 663 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm44871-201ENSMUST00000207821 497 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm24356-201ENSMUST00000082859 106 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Trim11Q99PQ2 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
Trim11Q99PQ2 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Mir193b-201ENSMUST00000103784 79 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm25377-201ENSMUST00000104334 129 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm22320-201ENSMUST00000157149 312 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm24054-201ENSMUST00000158619 105 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm23196-201ENSMUST00000158806 107 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm16546-201ENSMUST00000159442 355 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Mir6715-201ENSMUST00000184990 57 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm28848-201ENSMUST00000189984 168 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm43602-201ENSMUST00000196772 300 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm44338-201ENSMUST00000198614 110 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Gm7422-201ENSMUST00000220115 640 ntBASIC4.21□□□□□ -1.74
Trim11Q99PQ2 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.21□□□□□ -1.74
Trim11Q99PQ2 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm12238-201ENSMUST00000127764 124 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm24244-201ENSMUST00000157317 130 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm24720-201ENSMUST00000157518 166 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm24552-201ENSMUST00000158646 103 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm5967-201ENSMUST00000172723 494 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm22120-201ENSMUST00000175590 70 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm22775-201ENSMUST00000177630 120 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm23569-201ENSMUST00000180120 120 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm10292-201ENSMUST00000183142 581 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Mir7074-201ENSMUST00000183884 63 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm37001-201ENSMUST00000193377 190 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm17966-201ENSMUST00000193453 594 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm42774-201ENSMUST00000198854 283 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm25895-201ENSMUST00000083714 100 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Gm26165-201ENSMUST00000083791 138 ntBASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Trim11Q99PQ2 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms