Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Gm43680-201ENSMUST00000199466 340 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Gm44459-201ENSMUST00000203926 160 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Gm45375-201ENSMUST00000210338 280 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Cstf3Q99LI7 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Gm26457-201ENSMUST00000082678 78 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Gm26164-201ENSMUST00000083793 104 ntBASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cstf3Q99LI7 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cstf3Q99LI7 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm25526-201ENSMUST00000104332 132 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm6954-201ENSMUST00000117416 225 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm15211-201ENSMUST00000118932 528 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm14972-201ENSMUST00000121780 364 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm26027-201ENSMUST00000122725 268 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm27396-201ENSMUST00000157708 58 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm22654-201ENSMUST00000157874 105 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm24085-201ENSMUST00000175172 116 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Mir7242-201ENSMUST00000183710 79 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm28358-202ENSMUST00000189292 223 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm37037-201ENSMUST00000194475 424 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm45403-201ENSMUST00000209453 276 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm33654-201ENSMUST00000221704 215 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm21937-201ENSMUST00000222825 218 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Gm23615-201ENSMUST00000082602 65 ntBASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Cstf3Q99LI7 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm12412-201ENSMUST00000121867 328 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm12819-201ENSMUST00000122223 629 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm22073-201ENSMUST00000122668 189 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm22037-201ENSMUST00000157280 296 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm6788-201ENSMUST00000166459 270 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm27786-201ENSMUST00000184337 70 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm29229-201ENSMUST00000188874 323 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.62□□□□□ -1.99
Cstf3Q99LI7 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Mir193a-201ENSMUST00000083461 66 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Gm23847-201ENSMUST00000083829 110 ntBASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
Cstf3Q99LI7 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Mir542-201ENSMUST00000102186 85 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm24338-201ENSMUST00000104205 127 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm23987-201ENSMUST00000117039 129 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm25945-201ENSMUST00000122484 135 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm24681-201ENSMUST00000158760 107 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm23476-201ENSMUST00000158881 274 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
Cstf3Q99LI7 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm43600-201ENSMUST00000202134 223 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm45678-201ENSMUST00000210509 295 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Gm23264-201ENSMUST00000083372 107 ntBASIC2.61□□□□□ -1.99
Cstf3Q99LI7 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Gm25500-201ENSMUST00000104426 123 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Gm14296-202ENSMUST00000108931 750 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Gm14843-201ENSMUST00000119596 212 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Gm24911-201ENSMUST00000157292 136 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Gm24879-201ENSMUST00000158386 143 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Gm17166-201ENSMUST00000172006 431 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Gm25476-201ENSMUST00000175125 185 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.6□□□□□ -1.99
Cstf3Q99LI7 Gm19257-201ENSMUST00000186121 183 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 165.6 ms