Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Mir6914-201ENSMUST00000184999 69 ntBASIC2.81□□□□□ -1.96
H1fooQ8VIK3 Gm36946-201ENSMUST00000192706 435 ntBASIC2.81□□□□□ -1.96
H1fooQ8VIK3 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
H1fooQ8VIK3 Gm2189-201ENSMUST00000201419 429 ntBASIC2.81□□□□□ -1.96
H1fooQ8VIK3 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.81□□□□□ -1.96
H1fooQ8VIK3 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
H1fooQ8VIK3 Gm25632-201ENSMUST00000083112 85 ntBASIC2.81□□□□□ -1.96
H1fooQ8VIK3 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
H1fooQ8VIK3 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
H1fooQ8VIK3 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
H1fooQ8VIK3 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm13329-201ENSMUST00000117063 265 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm5396-201ENSMUST00000121222 532 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm23232-201ENSMUST00000157300 105 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm17117-201ENSMUST00000163665 299 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Mir6385-201ENSMUST00000184295 105 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm38311-201ENSMUST00000192945 165 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm43193-201ENSMUST00000197732 441 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm34779-201ENSMUST00000210036 263 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm45313-201ENSMUST00000210584 178 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.8□□□□□ -1.96
H1fooQ8VIK3 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Mir872-201ENSMUST00000104728 81 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Mir669g-201ENSMUST00000116809 123 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm12025-201ENSMUST00000117768 144 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm12646-201ENSMUST00000119144 238 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm13967-201ENSMUST00000120404 380 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm13581-201ENSMUST00000120675 278 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm15213-201ENSMUST00000122098 216 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm23589-201ENSMUST00000157660 105 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Mir3106-201ENSMUST00000175401 82 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm27521-201ENSMUST00000184022 64 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm44055-201ENSMUST00000204376 247 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Snord35b-201ENSMUST00000082833 87 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 AF357341-201ENSMUST00000083088 75 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Gm38031-201ENSMUST00000191819 3015 ntBASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
H1fooQ8VIK3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Snord70-201ENSMUST00000104157 87 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm22195-201ENSMUST00000116861 108 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm14770-201ENSMUST00000122197 312 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm25543-201ENSMUST00000122678 312 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm20660-201ENSMUST00000177515 289 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm23355-201ENSMUST00000177614 107 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm22910-201ENSMUST00000178568 132 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm23148-201ENSMUST00000180367 107 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm18357-201ENSMUST00000188184 580 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm28744-201ENSMUST00000189939 340 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm42621-201ENSMUST00000198114 275 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm25258-201ENSMUST00000083049 107 ntBASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.78□□□□□ -1.96
H1fooQ8VIK3 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
H1fooQ8VIK3 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm12550-201ENSMUST00000118478 329 ntBASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm12513-201ENSMUST00000118617 352 ntBASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm13432-201ENSMUST00000118861 241 ntBASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm11388-201ENSMUST00000120908 159 ntBASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm26099-201ENSMUST00000157248 109 ntBASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm23716-201ENSMUST00000157348 144 ntBASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm24998-201ENSMUST00000157908 89 ntBASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm24388-201ENSMUST00000177872 107 ntBASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC2.77□□□□□ -1.97
H1fooQ8VIK3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms