Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm22580-201ENSMUST00000083727 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm24260-201ENSMUST00000083741 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm23732-201ENSMUST00000083751 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm22682-201ENSMUST00000083854 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm25869-201ENSMUST00000083855 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm24693-201ENSMUST00000083885 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm26317-201ENSMUST00000083894 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm22352-201ENSMUST00000083917 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm24448-201ENSMUST00000083979 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm22798-201ENSMUST00000083992 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm26427-201ENSMUST00000093648 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm22886-201ENSMUST00000093714 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trim60Q8VI40 Gm22170-201ENSMUST00000097247 107 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Trim60Q8VI40 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.57□□□□□ -2
Trim60Q8VI40 Gm22151-201ENSMUST00000116963 58 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm12765-201ENSMUST00000117273 615 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm13153-201ENSMUST00000120969 637 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Mir1942-201ENSMUST00000157274 63 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm24212-201ENSMUST00000158258 132 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.56□□□□□ -2
Trim60Q8VI40 Gm9402-201ENSMUST00000196849 388 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm42739-201ENSMUST00000200687 226 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm44149-201ENSMUST00000204256 226 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm45730-201ENSMUST00000212560 395 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm8031-201ENSMUST00000213430 626 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm25135-201ENSMUST00000082648 143 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm25579-201ENSMUST00000083407 106 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.56□□□□□ -2
Trim60Q8VI40 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.56□□□□□ -2
Trim60Q8VI40 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Trim60Q8VI40 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim60Q8VI40 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Trim60Q8VI40 Gm26396-201ENSMUST00000104093 132 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm22674-201ENSMUST00000104413 131 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm13581-201ENSMUST00000120675 278 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm14821-201ENSMUST00000121975 435 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm650-201ENSMUST00000144428 1551 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm24997-201ENSMUST00000157910 105 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm24771-201ENSMUST00000158508 137 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
Trim60Q8VI40 Gm23191-201ENSMUST00000179147 107 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Trbv6-201ENSMUST00000193743 276 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm43286-201ENSMUST00000197420 424 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm34783-201ENSMUST00000209159 303 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.55□□□□□ -2
Trim60Q8VI40 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim60Q8VI40 Gm22443-201ENSMUST00000082890 107 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim60Q8VI40 Gm26327-201ENSMUST00000093724 111 ntBASIC2.55□□□□□ -2
Trim60Q8VI40 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
Trim60Q8VI40 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Trim60Q8VI40 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
Trim60Q8VI40 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.54□□□□□ -2
Trim60Q8VI40 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.54□□□□□ -2
Trim60Q8VI40 Gm16242-201ENSMUST00000117741 334 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Gm11420-201ENSMUST00000120047 402 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trim60Q8VI40 Gm23169-201ENSMUST00000157157 112 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Gm27510-201ENSMUST00000158214 64 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Gm24304-201ENSMUST00000177635 107 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Mir6353-201ENSMUST00000183596 113 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Mir7667-201ENSMUST00000183866 63 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Gm27761-201ENSMUST00000184091 131 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.54□□□□□ -2
Trim60Q8VI40 Gm37361-201ENSMUST00000194345 132 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Gm43264-201ENSMUST00000202284 325 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Gm17990-201ENSMUST00000211728 553 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trim60Q8VI40 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.54□□□□□ -2
Trim60Q8VI40 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.54□□□□□ -2
Trim60Q8VI40 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trim60Q8VI40 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trim60Q8VI40 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trim60Q8VI40 Gm15183-201ENSMUST00000118933 348 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm6574-201ENSMUST00000120037 362 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm25153-201ENSMUST00000157118 156 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm26105-201ENSMUST00000157253 190 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm22328-201ENSMUST00000158074 112 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm25162-201ENSMUST00000158906 159 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm7925-201ENSMUST00000166690 401 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm3027-201ENSMUST00000167579 451 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm26501-201ENSMUST00000178307 107 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Mir6370-201ENSMUST00000183510 120 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Mir7013-201ENSMUST00000183540 72 ntBASIC2.53□□□□□ -2
Trim60Q8VI40 Gm28838-201ENSMUST00000186338 315 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms