Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm12053-201ENSMUST00000119022 252 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm25392-201ENSMUST00000157335 297 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm23538-201ENSMUST00000157535 101 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Mir1967-201ENSMUST00000157789 82 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm24997-201ENSMUST00000157910 105 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm23196-201ENSMUST00000158806 107 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm25831-201ENSMUST00000158924 163 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm22800-201ENSMUST00000175627 94 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm4076-201ENSMUST00000179230 965 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm28666-201ENSMUST00000186649 274 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Nup35Q8R4R6 AC138401.1-201ENSMUST00000221533 116 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 AC239878.2-201ENSMUST00000224048 464 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Nup35Q8R4R6 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.9□□□□□ -2.26
Nup35Q8R4R6 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
Nup35Q8R4R6 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC0.9□□□□□ -2.26
Nup35Q8R4R6 Gm381-201ENSMUST00000117443 2037 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm12370-201ENSMUST00000117809 604 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Mup-ps14-201ENSMUST00000118437 532 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm14126-201ENSMUST00000122345 395 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Mup-ps2-201ENSMUST00000142602 533 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm22339-201ENSMUST00000157718 62 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm24960-201ENSMUST00000157923 90 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm21754-201ENSMUST00000177550 479 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm24713-201ENSMUST00000178850 107 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm25448-201ENSMUST00000180065 107 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Mir7063-201ENSMUST00000184158 91 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm27419-201ENSMUST00000184576 109 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm28196-201ENSMUST00000187719 640 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm44482-201ENSMUST00000199232 103 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm46136-201ENSMUST00000214730 565 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 AC116726.2-201ENSMUST00000217629 986 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm19441-201ENSMUST00000221545 330 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Gm2869-201ENSMUST00000124359 2621 ntBASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC0.9□□□□□ -2.27
Nup35Q8R4R6 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Nup35Q8R4R6 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Gm37630-201ENSMUST00000194210 1456 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Gm22073-201ENSMUST00000122668 189 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Gm25069-201ENSMUST00000175238 86 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Mir6388-201ENSMUST00000184417 75 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Gm9402-201ENSMUST00000196849 388 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Gm42925-201ENSMUST00000197359 285 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Gm10297-201ENSMUST00000207136 651 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Gm45268-201ENSMUST00000210046 370 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Mir221-201ENSMUST00000083488 95 ntBASIC0.89□□□□□ -2.27
Nup35Q8R4R6 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm12417-201ENSMUST00000119153 403 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm14554-201ENSMUST00000119548 661 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm14898-201ENSMUST00000120202 645 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm15861-201ENSMUST00000120979 339 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm8121-201ENSMUST00000153583 499 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm24915-201ENSMUST00000157288 78 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm23586-201ENSMUST00000157657 123 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm24851-201ENSMUST00000158028 103 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm24388-201ENSMUST00000177872 107 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Mir6382-201ENSMUST00000184055 110 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Mir7225-201ENSMUST00000184178 54 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm38167-201ENSMUST00000195704 1178 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm43199-201ENSMUST00000200019 307 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm45382-201ENSMUST00000210607 151 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm10092-201ENSMUST00000077110 180 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.88□□□□□ -2.27
Nup35Q8R4R6 Gm12636-201ENSMUST00000117395 624 ntBASIC0.87□□□□□ -2.27
Nup35Q8R4R6 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC0.87□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms