Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm24713-201ENSMUST00000178850 107 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm24897-201ENSMUST00000179033 107 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm25448-201ENSMUST00000180065 107 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Mir7026-201ENSMUST00000184384 67 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm43114-201ENSMUST00000198298 343 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm43232-201ENSMUST00000201346 364 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 AC159476.2-201ENSMUST00000216221 418 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm26328-201ENSMUST00000082821 107 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22997-201ENSMUST00000082845 107 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Gm25794-201ENSMUST00000083286 107 ntBASIC1.27□□□□□ -2.21
Ccdc28aQ8CEI3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm23202-201ENSMUST00000104376 129 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm23907-201ENSMUST00000104595 189 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22713-201ENSMUST00000116895 130 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm14852-201ENSMUST00000120065 647 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm24839-201ENSMUST00000122602 107 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22143-201ENSMUST00000157401 203 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm27396-201ENSMUST00000157708 58 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22338-201ENSMUST00000157715 129 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22389-201ENSMUST00000158193 301 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm25831-201ENSMUST00000158924 163 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Mir3103-201ENSMUST00000175474 67 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm24573-201ENSMUST00000175499 112 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22716-201ENSMUST00000177596 107 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm24464-201ENSMUST00000179697 107 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Mir7683-201ENSMUST00000183842 61 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Mir6917-201ENSMUST00000184111 61 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm5116-201ENSMUST00000187732 463 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm29627-201ENSMUST00000187984 463 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm42960-201ENSMUST00000202160 241 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm44564-201ENSMUST00000207985 180 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22810-201ENSMUST00000082741 158 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Gm26265-201ENSMUST00000083277 135 ntBASIC1.26□□□□□ -2.21
Ccdc28aQ8CEI3 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Gm23206-201ENSMUST00000122720 184 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Gm24784-201ENSMUST00000157640 62 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22768-201ENSMUST00000158366 153 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Gm26363-201ENSMUST00000158866 83 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Gm25451-201ENSMUST00000177832 121 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Gm29216-201ENSMUST00000187117 492 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Gm36984-201ENSMUST00000192770 235 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 AC162931.1-201ENSMUST00000214184 267 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.25□□□□□ -2.21
Ccdc28aQ8CEI3 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm12636-201ENSMUST00000117395 624 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm14558-201ENSMUST00000117458 381 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm14417-201ENSMUST00000120036 1074 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm8114-201ENSMUST00000172225 484 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22290-201ENSMUST00000177655 107 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22583-201ENSMUST00000178031 107 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm25361-201ENSMUST00000179358 76 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm28299-201ENSMUST00000189908 339 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm45232-201ENSMUST00000207811 162 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm7692-201ENSMUST00000213534 409 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Ear14-201ENSMUST00000049559 468 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Gm23503-201ENSMUST00000083903 107 ntBASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Ccdc28aQ8CEI3 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm22236-201ENSMUST00000157093 106 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Mir1942-201ENSMUST00000157274 63 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm23068-201ENSMUST00000158239 293 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm20477-201ENSMUST00000174028 280 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm21978-201ENSMUST00000179696 377 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm27711-201ENSMUST00000183802 118 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm28560-201ENSMUST00000186091 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm28334-201ENSMUST00000186653 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm28495-201ENSMUST00000188452 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm28232-201ENSMUST00000188683 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm28481-201ENSMUST00000189231 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm29059-201ENSMUST00000191534 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm37765-201ENSMUST00000192395 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm37237-201ENSMUST00000192893 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm36968-201ENSMUST00000193737 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm38290-201ENSMUST00000195238 315 ntBASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.23□□□□□ -2.21
Ccdc28aQ8CEI3 Gm9236-201ENSMUST00000196892 587 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms