Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm28412-201ENSMUST00000187243 177 ntBASIC1.53□□□□□ -2.16
Usp47Q8BY87 Gm28439-201ENSMUST00000187714 876 ntBASIC1.53□□□□□ -2.16
Usp47Q8BY87 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
Usp47Q8BY87 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.53□□□□□ -2.16
Usp47Q8BY87 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Usp47Q8BY87 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.53□□□□□ -2.17
Usp47Q8BY87 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.17
Usp47Q8BY87 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Usp47Q8BY87 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm24582-201ENSMUST00000103967 103 ntBASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm22496-201ENSMUST00000104493 88 ntBASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm24846-201ENSMUST00000158033 108 ntBASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm3025-201ENSMUST00000163454 489 ntBASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm25175-201ENSMUST00000178712 79 ntBASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Usp47Q8BY87 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm44024-201ENSMUST00000203008 476 ntBASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm44548-201ENSMUST00000208929 192 ntBASIC1.52□□□□□ -2.17
Usp47Q8BY87 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.52□□□□□ -2.17
Usp47Q8BY87 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Usp47Q8BY87 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Gm12191-201ENSMUST00000118307 348 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Gm6664-201ENSMUST00000119138 468 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Gm22527-201ENSMUST00000158816 106 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Gm19932-201ENSMUST00000177033 313 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Gm44125-201ENSMUST00000203068 448 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Gm45386-201ENSMUST00000210194 218 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Usp47Q8BY87 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.51□□□□□ -2.17
Usp47Q8BY87 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 Gm12656-201ENSMUST00000118149 577 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 Gm26157-201ENSMUST00000158974 126 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.5□□□□□ -2.17
Usp47Q8BY87 Mir3964-201ENSMUST00000174898 74 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 Gm25874-201ENSMUST00000178030 79 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Usp47Q8BY87 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Usp47Q8BY87 Gm44961-201ENSMUST00000207450 196 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 Gm44825-201ENSMUST00000207557 150 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 Gm44598-201ENSMUST00000207566 150 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 Gm24412-201ENSMUST00000083426 109 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.5□□□□□ -2.17
Usp47Q8BY87 Gm14899-201ENSMUST00000118673 548 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm11786-201ENSMUST00000120799 155 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.49□□□□□ -2.17
Usp47Q8BY87 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm26414-201ENSMUST00000157674 269 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm28838-201ENSMUST00000186338 315 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm28666-201ENSMUST00000186649 274 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm29635-201ENSMUST00000187221 315 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm29026-201ENSMUST00000187787 315 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm28797-201ENSMUST00000188543 315 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm28855-201ENSMUST00000188680 315 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm28705-201ENSMUST00000189548 315 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm28939-201ENSMUST00000190351 315 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm28223-201ENSMUST00000190469 315 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm29092-201ENSMUST00000190768 315 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm38044-201ENSMUST00000192964 487 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm26166-201ENSMUST00000083788 107 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Olfr575-201ENSMUST00000084812 957 ntBASIC1.49□□□□□ -2.17
Usp47Q8BY87 Gm23705-201ENSMUST00000104370 130 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm23991-201ENSMUST00000117033 93 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm15110-201ENSMUST00000117545 881 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm16428-201ENSMUST00000121193 723 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm15167-201ENSMUST00000121997 187 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm23538-201ENSMUST00000157535 101 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm25994-201ENSMUST00000175392 101 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm37319-201ENSMUST00000193500 636 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm43652-201ENSMUST00000196219 675 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm18242-201ENSMUST00000218455 542 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.48□□□□□ -2.17
Usp47Q8BY87 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Usp47Q8BY87 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Usp47Q8BY87 Gm22779-201ENSMUST00000104085 107 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Mir467h-201ENSMUST00000116759 121 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm22091-201ENSMUST00000116908 127 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm9703-201ENSMUST00000119573 343 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm14599-201ENSMUST00000120469 474 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.47□□□□□ -2.17
Usp47Q8BY87 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.47□□□□□ -2.17
Usp47Q8BY87 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms