Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Mir701-201ENSMUST00000102208 109 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Mir667-201ENSMUST00000102441 92 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Gm15244-201ENSMUST00000121122 130 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Gm24392-201ENSMUST00000158136 103 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Gm22989-201ENSMUST00000158313 86 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Gm26028-201ENSMUST00000158660 294 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Gm24667-201ENSMUST00000158938 103 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Gm2389-201ENSMUST00000160487 189 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Mir8096-201ENSMUST00000184526 127 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Gm44844-201ENSMUST00000207242 336 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Mir452-201ENSMUST00000093629 85 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Usp40Q8BWR4 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.24□□□□□ -1.73
Usp40Q8BWR4 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm25175-201ENSMUST00000178712 79 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm23922-201ENSMUST00000178792 79 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm23002-201ENSMUST00000179221 107 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm24657-201ENSMUST00000180085 79 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm22996-201ENSMUST00000180236 79 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm29320-201ENSMUST00000185235 615 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm29179-202ENSMUST00000186138 615 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm29448-201ENSMUST00000186675 615 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm29314-201ENSMUST00000186800 615 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm28253-202ENSMUST00000187971 615 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm29169-201ENSMUST00000189835 615 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 CT010449.1-201ENSMUST00000220624 153 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm25814-201ENSMUST00000082754 107 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Gm37387-201ENSMUST00000192201 1806 ntBASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Usp40Q8BWR4 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 AA413626-201ENSMUST00000121125 494 ntBASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Gm25456-201ENSMUST00000157952 109 ntBASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Gm23355-201ENSMUST00000177614 107 ntBASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Gm23148-201ENSMUST00000180367 107 ntBASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Mir376a-201ENSMUST00000197584 68 ntBASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Gm42526-201ENSMUST00000198956 393 ntBASIC4.22□□□□□ -1.73
Usp40Q8BWR4 LOC667541-201ENSMUST00000223408 278 ntBASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Usp40Q8BWR4 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm23577-201ENSMUST00000103950 110 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm24132-201ENSMUST00000104745 91 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm13541-201ENSMUST00000119519 283 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm6829-201ENSMUST00000119858 360 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm25373-201ENSMUST00000158156 115 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm24213-201ENSMUST00000158255 258 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm26291-201ENSMUST00000158889 137 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm17159-201ENSMUST00000169043 482 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm26337-201ENSMUST00000178000 79 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm37732-201ENSMUST00000194377 316 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 CT025689.3-201ENSMUST00000223817 301 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm26055-201ENSMUST00000083038 107 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm26121-201ENSMUST00000083364 162 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm650-201ENSMUST00000144428 1551 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm15697-201ENSMUST00000121946 2902 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.21□□□□□ -1.74
Usp40Q8BWR4 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Usp40Q8BWR4 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Usp40Q8BWR4 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.2□□□□□ -1.74
Usp40Q8BWR4 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.2□□□□□ -1.74
Usp40Q8BWR4 Gm23472-201ENSMUST00000101806 191 ntBASIC4.2□□□□□ -1.74
Usp40Q8BWR4 Gm24263-201ENSMUST00000104059 107 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 133.2 ms