Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm26175-201ENSMUST00000083794 131 ntBASIC2.06□□□□□ -2.08
Ccdc40Q8BI79 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.06□□□□□ -2.08
Ccdc40Q8BI79 Mir465c-1-201ENSMUST00000093560 81 ntBASIC2.06□□□□□ -2.08
Ccdc40Q8BI79 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Mir344e-201ENSMUST00000104677 66 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm14362-201ENSMUST00000121679 273 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm15254-201ENSMUST00000149567 273 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm24481-201ENSMUST00000157210 102 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm23331-201ENSMUST00000157423 108 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm26345-201ENSMUST00000157534 120 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm7925-201ENSMUST00000166690 401 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm22800-201ENSMUST00000175627 94 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm26864-201ENSMUST00000181346 156 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm37727-201ENSMUST00000191637 819 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm43583-201ENSMUST00000199235 303 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Ccdc40Q8BI79 Gm14624-201ENSMUST00000117746 192 ntBASIC2.04□□□□□ -2.08
Ccdc40Q8BI79 Gm12941-201ENSMUST00000117934 220 ntBASIC2.04□□□□□ -2.08
Ccdc40Q8BI79 Gm12053-201ENSMUST00000119022 252 ntBASIC2.04□□□□□ -2.08
Ccdc40Q8BI79 Mir3092-201ENSMUST00000174954 96 ntBASIC2.04□□□□□ -2.08
Ccdc40Q8BI79 Gm44870-201ENSMUST00000207291 357 ntBASIC2.04□□□□□ -2.08
Ccdc40Q8BI79 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.04□□□□□ -2.08
Ccdc40Q8BI79 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.04□□□□□ -2.08
Ccdc40Q8BI79 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.04□□□□□ -2.08
Ccdc40Q8BI79 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.04□□□□□ -2.08
Ccdc40Q8BI79 Gm11471-201ENSMUST00000121824 198 ntBASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Gm24962-201ENSMUST00000157917 109 ntBASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Gm27660-201ENSMUST00000184028 208 ntBASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Gm27979-201ENSMUST00000185126 56 ntBASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Gm45366-201ENSMUST00000209828 384 ntBASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ccdc40Q8BI79 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm26342-201ENSMUST00000104557 129 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm12779-201ENSMUST00000121496 143 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm16218-201ENSMUST00000155424 388 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm22257-201ENSMUST00000158687 301 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm5277-201ENSMUST00000164923 556 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm20689-201ENSMUST00000176033 279 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Mir6379-201ENSMUST00000183392 115 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Mir496b-201ENSMUST00000184935 113 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 AC102352.1-201ENSMUST00000224187 582 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm25813-201ENSMUST00000082748 191 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm24268-201ENSMUST00000082990 110 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm23462-201ENSMUST00000083264 104 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm22577-201ENSMUST00000083731 109 ntBASIC2.02□□□□□ -2.09
Ccdc40Q8BI79 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm15266-201ENSMUST00000119635 255 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm7953-201ENSMUST00000168278 469 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm27443-201ENSMUST00000184660 98 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm27490-201ENSMUST00000184754 128 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm28404-201ENSMUST00000190242 453 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm32175-201ENSMUST00000193641 346 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm37641-201ENSMUST00000193837 239 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm43582-201ENSMUST00000196149 343 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm45252-201ENSMUST00000211579 397 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm2829-201ENSMUST00000213121 499 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm23093-201ENSMUST00000083450 102 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.01□□□□□ -2.09
Ccdc40Q8BI79 Gm38388-201ENSMUST00000195569 1430 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm37096-201ENSMUST00000192317 2058 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm23551-201ENSMUST00000116852 121 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm6806-201ENSMUST00000120092 1006 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm14402-201ENSMUST00000122217 508 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm25115-201ENSMUST00000157187 140 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm24358-201ENSMUST00000158424 288 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm23181-201ENSMUST00000158685 110 ntBASIC2□□□□□ -2.09
Ccdc40Q8BI79 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2□□□□□ -2.09
Ccdc40Q8BI79 Gm9402-201ENSMUST00000196849 388 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms