Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.59□□□□□ -2.15
Clrn3Q8BHH8 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.59□□□□□ -2.16
Clrn3Q8BHH8 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
Clrn3Q8BHH8 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm25992-201ENSMUST00000102437 109 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm14713-201ENSMUST00000122362 686 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm22597-201ENSMUST00000157602 80 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm23043-201ENSMUST00000157890 109 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm24997-201ENSMUST00000157910 105 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm24768-201ENSMUST00000158512 94 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm25670-201ENSMUST00000178423 107 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm26239-201ENSMUST00000178842 107 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm22633-201ENSMUST00000179834 107 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm24267-201ENSMUST00000179841 107 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm27659-201ENSMUST00000183472 98 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Mir7062-201ENSMUST00000185038 66 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm18775-201ENSMUST00000190763 586 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm2676-201ENSMUST00000207279 606 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm44564-201ENSMUST00000207985 180 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm25813-201ENSMUST00000082748 191 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm24292-201ENSMUST00000082888 107 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Gm22723-201ENSMUST00000083820 129 ntBASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
Clrn3Q8BHH8 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Gm23950-201ENSMUST00000104026 129 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Gm23981-201ENSMUST00000157136 106 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Gm23269-201ENSMUST00000178701 107 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Gm21894-201ENSMUST00000179631 546 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Mir6352-201ENSMUST00000184495 116 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Gm10193-201ENSMUST00000188288 231 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Gm18774-201ENSMUST00000218269 601 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Clrn3Q8BHH8 Gm15526-201ENSMUST00000112504 204 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Gm14943-201ENSMUST00000118056 546 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Gm22664-201ENSMUST00000158719 105 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Gm22665-201ENSMUST00000158720 275 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Gm24333-201ENSMUST00000175101 84 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Mir28b-201ENSMUST00000175399 80 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Mir7679-201ENSMUST00000183379 63 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Gm27248-201ENSMUST00000184004 166 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Gm42475-201ENSMUST00000201212 295 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Olfr1208-202ENSMUST00000214121 2823 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Clrn3Q8BHH8 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm26396-201ENSMUST00000104093 132 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm12393-201ENSMUST00000117084 848 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm25625-201ENSMUST00000157221 96 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm24198-201ENSMUST00000157812 108 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm25457-201ENSMUST00000179509 107 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm9022-202ENSMUST00000183285 483 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm28560-201ENSMUST00000186091 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm28334-201ENSMUST00000186653 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm28495-201ENSMUST00000188452 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm28232-201ENSMUST00000188683 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm28481-201ENSMUST00000189231 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm29059-201ENSMUST00000191534 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm37765-201ENSMUST00000192395 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm37237-201ENSMUST00000192893 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm36968-201ENSMUST00000193737 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm38290-201ENSMUST00000195238 315 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm31230-201ENSMUST00000199725 785 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm45654-201ENSMUST00000210980 123 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Gm22683-201ENSMUST00000082854 137 ntBASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Clrn3Q8BHH8 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm14765-201ENSMUST00000121954 326 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm15077-201ENSMUST00000122344 362 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm23184-201ENSMUST00000122594 131 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm25162-201ENSMUST00000158906 159 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm24573-201ENSMUST00000175499 112 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm25933-201ENSMUST00000178943 108 ntBASIC1.54□□□□□ -2.16
Clrn3Q8BHH8 Gm24518-201ENSMUST00000180275 94 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms