Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mir3106-201ENSMUST00000175401 82 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm29512-201ENSMUST00000185544 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28110-201ENSMUST00000185782 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm29057-201ENSMUST00000186468 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm29661-201ENSMUST00000186781 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28737-201ENSMUST00000186808 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm29118-201ENSMUST00000186908 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28433-201ENSMUST00000187085 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28759-201ENSMUST00000187621 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28831-201ENSMUST00000187739 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28200-201ENSMUST00000187778 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28752-201ENSMUST00000188340 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm29378-201ENSMUST00000188723 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28569-201ENSMUST00000188748 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28120-201ENSMUST00000188812 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28369-201ENSMUST00000188993 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm29037-201ENSMUST00000189092 313 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28909-201ENSMUST00000189406 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm28861-201ENSMUST00000189681 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm29180-201ENSMUST00000190003 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm29575-201ENSMUST00000190597 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm29469-201ENSMUST00000191448 315 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm43680-201ENSMUST00000199466 340 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm45207-201ENSMUST00000207469 145 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.98□□□□□ -1.93
Ubfd1Q78JW9 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm23747-201ENSMUST00000104228 131 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm25539-201ENSMUST00000116886 122 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm3788-201ENSMUST00000119949 136 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm23214-201ENSMUST00000122716 157 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm14298-201ENSMUST00000139032 237 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm16356-201ENSMUST00000143300 169 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm24601-201ENSMUST00000157970 143 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm24213-201ENSMUST00000158255 258 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm22945-201ENSMUST00000158557 157 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm23003-201ENSMUST00000179948 107 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm28724-201ENSMUST00000186149 625 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm28995-201ENSMUST00000186625 261 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm37923-201ENSMUST00000191624 161 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm38019-201ENSMUST00000195133 380 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm23247-201ENSMUST00000083373 107 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.97□□□□□ -1.93
Ubfd1Q78JW9 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Ubfd1Q78JW9 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gm13672-201ENSMUST00000117554 459 ntBASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gm22598-201ENSMUST00000157600 127 ntBASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gm26215-201ENSMUST00000158584 139 ntBASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gm24487-201ENSMUST00000178017 63 ntBASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gm37162-201ENSMUST00000191708 551 ntBASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gm25651-201ENSMUST00000083782 119 ntBASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Ubfd1Q78JW9 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Mir693-201ENSMUST00000102187 89 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm24582-201ENSMUST00000103967 103 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm24890-201ENSMUST00000104389 102 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm25111-201ENSMUST00000116686 147 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm11460-201ENSMUST00000118200 361 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm13711-201ENSMUST00000119708 453 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm12876-201ENSMUST00000120975 408 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm12155-201ENSMUST00000121267 160 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm23331-201ENSMUST00000157423 108 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm25373-201ENSMUST00000158156 115 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm22853-201ENSMUST00000174974 131 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm9830-201ENSMUST00000178509 357 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Mir7227-201ENSMUST00000200408 59 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm8940-201ENSMUST00000212585 219 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm30534-201ENSMUST00000217928 207 ntBASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.95□□□□□ -1.94
Ubfd1Q78JW9 Gm23453-201ENSMUST00000083326 106 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 155.9 ms