Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Gm25739-201ENSMUST00000082886 107 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Mir29c-201ENSMUST00000083614 88 ntBASIC0.83□□□□□ -2.28
Topbp1Q6ZQF0 Gm45263-201ENSMUST00000210377 1375 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Gm12096-201ENSMUST00000121149 829 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Gm24716-201ENSMUST00000157524 104 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Gm26236-201ENSMUST00000175536 137 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Gm11392-201ENSMUST00000181419 710 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Mir7077-201ENSMUST00000183991 57 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Gm45636-201ENSMUST00000210497 1064 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 AL929285.1-201ENSMUST00000215522 229 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Gm23939-201ENSMUST00000082880 133 ntBASIC0.82□□□□□ -2.28
Topbp1Q6ZQF0 Gm11389-201ENSMUST00000121407 430 ntBASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 Mir1967-201ENSMUST00000157789 82 ntBASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 Gm23020-201ENSMUST00000158766 253 ntBASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 Gm17154-201ENSMUST00000165748 431 ntBASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 Gm18691-201ENSMUST00000203593 872 ntBASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 Gm29754-201ENSMUST00000206269 358 ntBASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 Gm25810-201ENSMUST00000082752 108 ntBASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Topbp1Q6ZQF0 Gm25647-201ENSMUST00000101832 78 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm25823-201ENSMUST00000101995 78 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm14774-201ENSMUST00000117857 536 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm15126-201ENSMUST00000118631 833 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm12507-201ENSMUST00000119155 415 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm23332-201ENSMUST00000157424 275 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm24220-201ENSMUST00000177753 79 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm25988-201ENSMUST00000177759 79 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm23471-201ENSMUST00000177886 79 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm26488-201ENSMUST00000178225 79 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm23449-201ENSMUST00000179208 79 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm25221-201ENSMUST00000180051 79 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Gm44024-201ENSMUST00000203008 476 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.8□□□□□ -2.28
Topbp1Q6ZQF0 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm11384-201ENSMUST00000121376 303 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm25491-201ENSMUST00000158733 308 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm18296-201ENSMUST00000192475 783 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm42924-201ENSMUST00000197261 185 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm35736-201ENSMUST00000203681 313 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm18854-201ENSMUST00000211196 329 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm23246-201ENSMUST00000083371 67 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm24793-201ENSMUST00000104289 132 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm11891-201ENSMUST00000121241 619 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm3027-201ENSMUST00000167579 451 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm29492-201ENSMUST00000187124 457 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Mir1291-201ENSMUST00000199842 117 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm44301-201ENSMUST00000200362 143 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm44524-201ENSMUST00000203899 271 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
Topbp1Q6ZQF0 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Gm25283-201ENSMUST00000157272 77 ntBASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Gm23473-201ENSMUST00000158883 116 ntBASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Traj60-201ENSMUST00000167781 54 ntBASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Gm22418-201ENSMUST00000180326 107 ntBASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Gm42807-201ENSMUST00000200141 329 ntBASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Gm44404-201ENSMUST00000203979 636 ntBASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Gm23727-201ENSMUST00000083352 164 ntBASIC0.78□□□□□ -2.28
Topbp1Q6ZQF0 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm26213-201ENSMUST00000158582 110 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Mir6341-201ENSMUST00000183490 121 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm29288-201ENSMUST00000191582 901 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm43493-201ENSMUST00000199837 202 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm45438-201ENSMUST00000210242 564 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm45730-201ENSMUST00000212560 395 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm46193-201ENSMUST00000219399 364 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm10038-201ENSMUST00000077233 441 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Mir224-201ENSMUST00000083608 82 ntBASIC0.77□□□□□ -2.29
Topbp1Q6ZQF0 Gm25885-201ENSMUST00000157779 109 ntBASIC0.76□□□□□ -2.29
Topbp1Q6ZQF0 Gm16399-201ENSMUST00000181423 219 ntBASIC0.76□□□□□ -2.29
Topbp1Q6ZQF0 Mir7667-201ENSMUST00000183866 63 ntBASIC0.76□□□□□ -2.29
Topbp1Q6ZQF0 Gm42623-201ENSMUST00000197225 379 ntBASIC0.76□□□□□ -2.29
Topbp1Q6ZQF0 Gm43897-201ENSMUST00000204019 309 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms