Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm15309-201ENSMUST00000121644 240 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Snord87-201ENSMUST00000175437 87 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm22862-201ENSMUST00000178593 121 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm42807-201ENSMUST00000200141 329 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm44962-201ENSMUST00000206460 279 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm25257-201ENSMUST00000083907 110 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm12016-201ENSMUST00000119079 681 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm22611-201ENSMUST00000158288 150 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm43578-201ENSMUST00000201250 459 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.19□□□□□ -2.22
Scn10aQ6QIY3 Gm6587-201ENSMUST00000120219 613 ntBASIC1.18□□□□□ -2.22
Scn10aQ6QIY3 Gm14360-201ENSMUST00000120670 393 ntBASIC1.18□□□□□ -2.22
Scn10aQ6QIY3 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC1.18□□□□□ -2.22
Scn10aQ6QIY3 Gm25166-201ENSMUST00000158909 111 ntBASIC1.18□□□□□ -2.22
Scn10aQ6QIY3 Gm29231-201ENSMUST00000179850 319 ntBASIC1.18□□□□□ -2.22
Scn10aQ6QIY3 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
Scn10aQ6QIY3 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.18□□□□□ -2.22
Scn10aQ6QIY3 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Scn10aQ6QIY3 Gm14852-201ENSMUST00000120065 647 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm12825-201ENSMUST00000120249 563 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm14979-201ENSMUST00000121561 1035 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm15279-201ENSMUST00000155593 288 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Mir1949-201ENSMUST00000157434 141 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm25220-201ENSMUST00000157546 95 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm25454-201ENSMUST00000157947 315 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm25334-201ENSMUST00000158036 110 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Mir6411-201ENSMUST00000183556 108 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm44050-201ENSMUST00000204263 527 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm18488-201ENSMUST00000215082 364 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm10360-201ENSMUST00000097219 272 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm25497-201ENSMUST00000104425 132 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm14674-201ENSMUST00000117816 342 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm25020-201ENSMUST00000178071 107 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm21726-201ENSMUST00000179654 392 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm24264-201ENSMUST00000179835 94 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Scn10aQ6QIY3 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm43680-201ENSMUST00000199466 340 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm44825-201ENSMUST00000207557 150 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm44598-201ENSMUST00000207566 150 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm14594-201ENSMUST00000118052 537 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm14590-201ENSMUST00000118934 537 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm24772-201ENSMUST00000158507 110 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm14596-201ENSMUST00000180268 537 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm14595-201ENSMUST00000180335 537 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm27588-201ENSMUST00000185096 263 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm27964-201ENSMUST00000185195 62 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Gm10298-201ENSMUST00000074801 265 ntBASIC1.16□□□□□ -2.22
Scn10aQ6QIY3 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Gm20386-201ENSMUST00000174010 132 ntBASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Gm9236-201ENSMUST00000196892 587 ntBASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Mir27b-201ENSMUST00000083541 73 ntBASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Scn10aQ6QIY3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Gm24582-201ENSMUST00000103967 103 ntBASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Gm11854-201ENSMUST00000117839 446 ntBASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Gm25047-201ENSMUST00000122667 104 ntBASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Gm27980-201ENSMUST00000184094 169 ntBASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Gm29603-201ENSMUST00000186792 334 ntBASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Gm42976-201ENSMUST00000200313 222 ntBASIC1.14□□□□□ -2.23
Scn10aQ6QIY3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms