Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Mir701-201ENSMUST00000102208 109 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm12042-201ENSMUST00000120479 301 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm25153-201ENSMUST00000157118 156 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm26102-201ENSMUST00000157251 284 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm22080-201ENSMUST00000157591 106 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm22500-201ENSMUST00000158982 99 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm6801-201ENSMUST00000190697 339 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm34073-201ENSMUST00000195736 212 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm43510-201ENSMUST00000197922 353 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm6030-201ENSMUST00000078768 402 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Gm22365-201ENSMUST00000093750 117 ntBASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Smarca1Q6PGB8 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm26247-201ENSMUST00000116702 91 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm15211-201ENSMUST00000118932 528 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm26159-201ENSMUST00000158968 104 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm3027-201ENSMUST00000167579 451 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm24082-201ENSMUST00000175175 83 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Mir5099-201ENSMUST00000175257 74 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Mir3076-201ENSMUST00000175415 60 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm23660-201ENSMUST00000178362 79 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm24088-201ENSMUST00000179100 79 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Mir7013-201ENSMUST00000183540 72 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm45315-201ENSMUST00000209283 333 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 Gm26066-201ENSMUST00000083385 109 ntBASIC2.97□□□□□ -1.93
Smarca1Q6PGB8 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
Smarca1Q6PGB8 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
Smarca1Q6PGB8 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Smarca1Q6PGB8 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
Smarca1Q6PGB8 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm22782-201ENSMUST00000104082 132 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm13457-201ENSMUST00000117885 267 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm25434-201ENSMUST00000158278 167 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm25707-201ENSMUST00000175120 96 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm27527-201ENSMUST00000183903 99 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm28740-201ENSMUST00000186142 215 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm18971-201ENSMUST00000197240 374 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm44459-201ENSMUST00000203926 160 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm45375-201ENSMUST00000210338 280 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Gm8940-201ENSMUST00000212585 219 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Smarca1Q6PGB8 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm9009-201ENSMUST00000117321 326 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm8260-201ENSMUST00000119230 353 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm24481-201ENSMUST00000157210 102 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm23829-201ENSMUST00000157392 270 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm25384-201ENSMUST00000157807 105 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm23476-201ENSMUST00000158881 274 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm10105-201ENSMUST00000184601 270 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm29553-201ENSMUST00000189692 279 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm37399-201ENSMUST00000195224 416 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm43600-201ENSMUST00000202134 223 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm44425-201ENSMUST00000203739 429 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Gm44903-201ENSMUST00000206840 130 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Smarca1Q6PGB8 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm42606-201ENSMUST00000114209 239 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm14602-201ENSMUST00000118625 340 ntBASIC2.94□□□□□ -1.94
Smarca1Q6PGB8 Gm25827-201ENSMUST00000157089 107 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms