Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm22961-201ENSMUST00000157964 106 ntBASIC2.37□□□□□ -2.03
Snrnp40Q6PE01 Gm22534-201ENSMUST00000158173 104 ntBASIC2.37□□□□□ -2.03
Snrnp40Q6PE01 Gm24577-201ENSMUST00000158580 63 ntBASIC2.37□□□□□ -2.03
Snrnp40Q6PE01 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Snrnp40Q6PE01 Gm26180-201ENSMUST00000179942 107 ntBASIC2.37□□□□□ -2.03
Snrnp40Q6PE01 Gm38311-201ENSMUST00000192945 165 ntBASIC2.37□□□□□ -2.03
Snrnp40Q6PE01 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.37□□□□□ -2.03
Snrnp40Q6PE01 Gm26458-201ENSMUST00000082832 128 ntBASIC2.37□□□□□ -2.03
Snrnp40Q6PE01 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Snrnp40Q6PE01 Gm23803-201ENSMUST00000104610 132 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm12617-201ENSMUST00000121268 381 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm23889-201ENSMUST00000122689 104 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm26278-201ENSMUST00000157098 132 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm22651-201ENSMUST00000157872 94 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm25982-201ENSMUST00000157920 101 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm22389-201ENSMUST00000158193 301 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm25866-201ENSMUST00000158245 112 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm22257-201ENSMUST00000158687 301 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm16232-201ENSMUST00000162856 167 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm7258-201ENSMUST00000179317 300 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm43083-201ENSMUST00000199594 476 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm44825-201ENSMUST00000207557 150 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm44598-201ENSMUST00000207566 150 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm45673-201ENSMUST00000210293 358 ntBASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.36□□□□□ -2.03
Snrnp40Q6PE01 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm24280-201ENSMUST00000104237 134 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm26015-201ENSMUST00000104402 125 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm12550-201ENSMUST00000118478 329 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm23867-201ENSMUST00000122649 274 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm22791-201ENSMUST00000157232 145 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm22483-201ENSMUST00000157986 274 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm23191-201ENSMUST00000179147 107 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm29231-201ENSMUST00000179850 319 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Mir6905-201ENSMUST00000184228 70 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm27753-201ENSMUST00000184742 203 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm37807-201ENSMUST00000194310 190 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm18971-201ENSMUST00000197240 374 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm26379-202ENSMUST00000200225 132 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm44555-201ENSMUST00000209008 148 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm9318-201ENSMUST00000222444 438 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Snora23-201ENSMUST00000082517 184 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm22620-201ENSMUST00000082700 133 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm23040-201ENSMUST00000083869 163 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.35□□□□□ -2.03
Snrnp40Q6PE01 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm24937-201ENSMUST00000122597 134 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm16355-201ENSMUST00000128606 231 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm23829-201ENSMUST00000157392 270 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm27220-201ENSMUST00000183453 262 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm27959-201ENSMUST00000185172 111 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Trbv6-201ENSMUST00000193743 276 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm37007-201ENSMUST00000194234 319 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm25820-202ENSMUST00000197479 128 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.34□□□□□ -2.03
Snrnp40Q6PE01 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.34□□□□□ -2.04
Snrnp40Q6PE01 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Gm14287-201ENSMUST00000121060 117 ntBASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Gm23213-201ENSMUST00000122715 313 ntBASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Gm23000-201ENSMUST00000157083 139 ntBASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Gm22099-201ENSMUST00000157925 123 ntBASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Gm23024-201ENSMUST00000158770 292 ntBASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Snrnp40Q6PE01 Gm10105-201ENSMUST00000184601 270 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms