Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm29635-201ENSMUST00000187221 315 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm29026-201ENSMUST00000187787 315 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm28797-201ENSMUST00000188543 315 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm28855-201ENSMUST00000188680 315 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm28705-201ENSMUST00000189548 315 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm28939-201ENSMUST00000190351 315 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm28223-201ENSMUST00000190469 315 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm29092-201ENSMUST00000190768 315 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm43286-201ENSMUST00000197420 424 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm45730-201ENSMUST00000212560 395 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.57□□□□□ -2
Hmgb4Q6P8W9 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Hmgb4Q6P8W9 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm22620-201ENSMUST00000082700 133 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.57□□□□□ -2
Hmgb4Q6P8W9 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm26396-201ENSMUST00000104093 132 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm12513-201ENSMUST00000118617 352 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm15497-201ENSMUST00000119137 551 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm22227-201ENSMUST00000157356 259 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm27510-201ENSMUST00000158214 64 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm8580-201ENSMUST00000160295 464 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm24810-201ENSMUST00000175317 70 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm26501-201ENSMUST00000178307 107 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm37361-201ENSMUST00000194345 132 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm38109-201ENSMUST00000195386 181 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm43193-201ENSMUST00000197732 441 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm23096-201ENSMUST00000083447 107 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Hmgb4Q6P8W9 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm23551-201ENSMUST00000116852 121 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm16242-201ENSMUST00000117741 334 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm15029-201ENSMUST00000119742 199 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm23980-201ENSMUST00000157135 158 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm24210-201ENSMUST00000158263 133 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm24878-201ENSMUST00000158782 104 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Mir195b-201ENSMUST00000184814 97 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm34073-201ENSMUST00000195736 212 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm43723-201ENSMUST00000196886 189 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm18971-201ENSMUST00000197240 374 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm43007-201ENSMUST00000197618 291 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm43626-201ENSMUST00000198575 162 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm8940-201ENSMUST00000212585 219 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Gm25207-201ENSMUST00000093745 107 ntBASIC2.55□□□□□ -2
Hmgb4Q6P8W9 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.55□□□□□ -2
Hmgb4Q6P8W9 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm24582-201ENSMUST00000103967 103 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Mir878-201ENSMUST00000104680 78 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm7164-201ENSMUST00000117503 450 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm13756-201ENSMUST00000117618 222 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm11420-201ENSMUST00000120047 402 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm14287-201ENSMUST00000121060 117 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm23600-201ENSMUST00000157260 71 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm23641-201ENSMUST00000157857 101 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm7925-201ENSMUST00000166690 401 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm5967-201ENSMUST00000172723 494 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Mir6386-201ENSMUST00000183558 104 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm38050-201ENSMUST00000191904 238 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm44478-201ENSMUST00000204875 114 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm17990-201ENSMUST00000211728 553 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Gm45815-201ENSMUST00000220241 146 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Hmgb4Q6P8W9 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.53□□□□□ -2
Hmgb4Q6P8W9 Gm22270-201ENSMUST00000104034 132 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms