Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.63□□□□□ -1.83
Cpsf6Q6NVF9 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Snord66-201ENSMUST00000104051 75 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm9157-201ENSMUST00000117673 225 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm23644-201ENSMUST00000157856 77 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm17159-201ENSMUST00000169043 482 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm44352-201ENSMUST00000196358 110 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm9377-201ENSMUST00000207227 623 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Snora19-201ENSMUST00000082962 132 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm23658-201ENSMUST00000083233 132 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm23947-201ENSMUST00000093636 107 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.62□□□□□ -1.83
Cpsf6Q6NVF9 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Gm25456-201ENSMUST00000157952 109 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Gm22316-201ENSMUST00000158012 216 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Gm7449-201ENSMUST00000194393 663 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Gm44338-201ENSMUST00000198614 110 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Gm26449-201ENSMUST00000082452 104 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cpsf6Q6NVF9 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm24276-201ENSMUST00000102181 110 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Mir92b-201ENSMUST00000102300 83 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm23492-201ENSMUST00000116837 115 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm15936-201ENSMUST00000118706 460 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm12143-201ENSMUST00000119666 332 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm14593-201ENSMUST00000119948 294 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm13868-201ENSMUST00000122411 294 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm25269-201ENSMUST00000122601 104 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm22075-201ENSMUST00000158599 192 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Mir7074-201ENSMUST00000183884 63 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm33866-201ENSMUST00000196911 289 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm19244-201ENSMUST00000204340 253 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm45116-201ENSMUST00000207392 275 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm25634-201ENSMUST00000082667 105 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm26165-201ENSMUST00000083791 138 ntBASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cpsf6Q6NVF9 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Gm13687-201ENSMUST00000119857 282 ntBASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Gm5963-201ENSMUST00000143451 236 ntBASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Gm24916-201ENSMUST00000157287 79 ntBASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Gm5829-201ENSMUST00000191383 351 ntBASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Trav5-2-201ENSMUST00000199855 280 ntBASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Gm3829-201ENSMUST00000222362 619 ntBASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cpsf6Q6NVF9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Cpsf6Q6NVF9 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Cpsf6Q6NVF9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cpsf6Q6NVF9 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cpsf6Q6NVF9 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.58□□□□□ -1.84
Cpsf6Q6NVF9 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cpsf6Q6NVF9 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 215.7 ms