Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm23474-201ENSMUST00000158884 75 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm23355-201ENSMUST00000177614 107 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm23148-201ENSMUST00000180367 107 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm28591-201ENSMUST00000185259 183 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm28650-201ENSMUST00000188413 411 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm28744-201ENSMUST00000189939 340 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm28921-201ENSMUST00000190219 378 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm37713-201ENSMUST00000191746 198 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm37417-201ENSMUST00000195257 454 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Mir3535-201ENSMUST00000197651 147 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm22979-201ENSMUST00000082609 159 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm25258-201ENSMUST00000083049 107 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Gm15102-201ENSMUST00000118740 1502 ntBASIC3.18□□□□□ -1.9
Sp140Q6NSQ5 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm22779-201ENSMUST00000104085 107 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm11065-201ENSMUST00000111462 228 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm24640-201ENSMUST00000116949 126 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm22626-201ENSMUST00000116990 126 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm12954-201ENSMUST00000118610 611 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm14877-201ENSMUST00000119803 478 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm23641-201ENSMUST00000157857 101 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm24959-201ENSMUST00000157924 146 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm23760-201ENSMUST00000158350 116 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm5967-201ENSMUST00000172723 494 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm24084-201ENSMUST00000175173 137 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm25749-201ENSMUST00000175485 111 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm25450-201ENSMUST00000179144 107 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm24761-201ENSMUST00000179589 127 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm24488-201ENSMUST00000179934 127 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm25701-201ENSMUST00000179988 127 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm26431-201ENSMUST00000180199 127 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm1833-201ENSMUST00000191608 682 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm37763-201ENSMUST00000193445 120 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm32381-201ENSMUST00000203192 476 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm44520-201ENSMUST00000205447 802 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm45420-201ENSMUST00000211243 425 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm25896-201ENSMUST00000083713 136 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Sp140Q6NSQ5 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm11572-201ENSMUST00000119164 120 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm12617-201ENSMUST00000121268 381 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm12276-201ENSMUST00000121709 301 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Mir1942-201ENSMUST00000157274 63 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm22225-201ENSMUST00000157358 278 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm20651-201ENSMUST00000177219 329 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm20630-201ENSMUST00000177387 551 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm27796-201ENSMUST00000183863 261 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Mir8096-201ENSMUST00000184526 127 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm44824-201ENSMUST00000207021 229 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.16□□□□□ -1.9
Sp140Q6NSQ5 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Sp140Q6NSQ5 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.15□□□□□ -1.9
Sp140Q6NSQ5 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.15□□□□□ -1.9
Sp140Q6NSQ5 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.15□□□□□ -1.9
Sp140Q6NSQ5 Gm26500-201ENSMUST00000101867 106 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm25875-201ENSMUST00000104323 107 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm13729-201ENSMUST00000120328 406 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm22447-201ENSMUST00000158155 92 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm23053-201ENSMUST00000175136 96 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm23864-201ENSMUST00000177607 107 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm25939-201ENSMUST00000179876 191 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm27374-201ENSMUST00000183660 81 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm28000-201ENSMUST00000184380 85 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.15□□□□□ -1.91
Sp140Q6NSQ5 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 96.7 ms