Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm43498-201ENSMUST00000202002 1486 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm8988-201ENSMUST00000155015 1240 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm27869-201ENSMUST00000184327 122 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm29397-201ENSMUST00000185205 333 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC0.19□□□□□ -2.38
Col7a1Q63870 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm43493-201ENSMUST00000199837 202 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Col7a1Q63870 AC115047.1-201ENSMUST00000213795 322 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm25799-201ENSMUST00000082643 107 ntBASIC0.19□□□□□ -2.38
Col7a1Q63870 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm8403-201ENSMUST00000189712 1298 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm29516-201ENSMUST00000190402 468 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm10092-201ENSMUST00000077110 180 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm23629-201ENSMUST00000082465 107 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Col7a1Q63870 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
Col7a1Q63870 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm11904-201ENSMUST00000120562 248 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm24747-201ENSMUST00000157835 87 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Nron-204ENSMUST00000158971 370 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm26157-201ENSMUST00000158974 126 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Mir6364-201ENSMUST00000183396 86 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm21147-201ENSMUST00000186046 913 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm44469-201ENSMUST00000198558 79 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm22685-201ENSMUST00000082848 106 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm24456-201ENSMUST00000083198 107 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm14442-201ENSMUST00000119690 1736 ntBASIC0.18□□□□□ -2.38
Col7a1Q63870 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Col7a1Q63870 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm12825-201ENSMUST00000120249 563 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Mir669m-1-201ENSMUST00000158945 98 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm22234-201ENSMUST00000174906 65 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm27415-201ENSMUST00000183720 95 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm27660-201ENSMUST00000184028 208 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm44976-201ENSMUST00000205543 261 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 AC157772.2-201ENSMUST00000228202 259 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col7a1Q63870 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Col7a1Q63870 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
Col7a1Q63870 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm13806-201ENSMUST00000117822 325 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm11429-201ENSMUST00000119089 144 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm23229-201ENSMUST00000157297 105 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Trbv12-3-201ENSMUST00000192675 372 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm42625-201ENSMUST00000198611 922 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 AC125167.1-201ENSMUST00000198698 141 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Mir3066-201ENSMUST00000175296 83 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm37098-201ENSMUST00000192290 244 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm44403-201ENSMUST00000198554 129 ntBASIC0.17□□□□□ -2.38
Col7a1Q63870 Gm22561-201ENSMUST00000157331 84 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Gm26213-201ENSMUST00000158582 110 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Mir1291-201ENSMUST00000199842 117 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
Col7a1Q63870 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col7a1Q63870 Snord95-201ENSMUST00000082846 68 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Mir670-201ENSMUST00000102380 100 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
Col7a1Q63870 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
Col7a1Q63870 Gm25961-201ENSMUST00000157174 135 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Gm17052-201ENSMUST00000165496 289 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Gm7346-201ENSMUST00000169661 476 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.16□□□□□ -2.38
Col7a1Q63870 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
Col7a1Q63870 Gm18551-201ENSMUST00000195594 642 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Gm43286-201ENSMUST00000197420 424 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Mir300-201ENSMUST00000083485 79 ntBASIC0.16□□□□□ -2.38
Col7a1Q63870 Mndal-204ENSMUST00000188804 2026 ntAPPRIS P2 TSL 1 (best) BASIC0.16□□□□□ -2.38
Col7a1Q63870 Gm11367-201ENSMUST00000117802 120 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm13541-201ENSMUST00000119519 283 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm24965-201ENSMUST00000157922 106 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Mir3057-201ENSMUST00000175040 91 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm24304-201ENSMUST00000177635 107 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm22114-201ENSMUST00000177756 107 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Col7a1Q63870 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm45366-201ENSMUST00000209828 384 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm45673-201ENSMUST00000210293 358 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm22061-201ENSMUST00000082557 107 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm23690-201ENSMUST00000083036 94 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Mir103-1-201ENSMUST00000083619 86 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm23812-201ENSMUST00000175156 84 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm23374-201ENSMUST00000175408 84 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm25672-201ENSMUST00000180111 107 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Mir6338-201ENSMUST00000183389 109 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Gm36997-201ENSMUST00000195090 707 ntBASIC0.15□□□□□ -2.39
Col7a1Q63870 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 119.7 ms