Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm24049-201ENSMUST00000102409 100 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm12934-201ENSMUST00000119221 343 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm9225-201ENSMUST00000121921 836 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm23184-201ENSMUST00000122594 131 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm26345-201ENSMUST00000157534 120 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm25335-201ENSMUST00000158043 103 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm24076-201ENSMUST00000158179 94 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.9□□□□□ -2.11
Usf1Q61069 Gm11392-201ENSMUST00000181419 710 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm28951-201ENSMUST00000190742 313 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm32033-201ENSMUST00000193483 339 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm43582-201ENSMUST00000196149 343 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.9□□□□□ -2.11
Usf1Q61069 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Usf1Q61069 Gm22978-201ENSMUST00000082607 160 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm24035-201ENSMUST00000082867 107 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Usf1Q61069 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.9□□□□□ -2.11
Usf1Q61069 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.89□□□□□ -2.11
Usf1Q61069 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Usf1Q61069 Mir301b-201ENSMUST00000102333 97 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm22771-201ENSMUST00000104449 91 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm14823-201ENSMUST00000117698 238 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm15896-201ENSMUST00000118045 440 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.89□□□□□ -2.11
Usf1Q61069 Gm24638-201ENSMUST00000179807 132 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm29604-201ENSMUST00000187176 163 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm29657-201ENSMUST00000189807 342 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm6059-201ENSMUST00000196903 340 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm42509-201ENSMUST00000197390 781 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.89□□□□□ -2.11
Usf1Q61069 Gm43978-201ENSMUST00000203491 451 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm22620-201ENSMUST00000082700 133 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gm22866-201ENSMUST00000083947 177 ntBASIC1.89□□□□□ -2.11
Usf1Q61069 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Usf1Q61069 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Usf1Q61069 Gm25507-201ENSMUST00000116981 144 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm14766-201ENSMUST00000121689 367 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm27396-201ENSMUST00000157708 58 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm15900-201ENSMUST00000161584 342 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm16326-201ENSMUST00000162843 414 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm24418-201ENSMUST00000177597 79 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm24639-201ENSMUST00000178518 79 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm23076-201ENSMUST00000179082 79 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm24862-201ENSMUST00000179103 79 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm23310-201ENSMUST00000179105 79 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm25077-201ENSMUST00000179157 79 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm25461-201ENSMUST00000179293 79 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.88□□□□□ -2.11
Usf1Q61069 Gm38261-201ENSMUST00000192608 316 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm37361-201ENSMUST00000194345 132 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.88□□□□□ -2.11
Usf1Q61069 Mir3068-202ENSMUST00000197755 79 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Mir7217-201ENSMUST00000200304 62 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Mir7215-201ENSMUST00000200383 51 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Gm25698-201ENSMUST00000082897 107 ntBASIC1.88□□□□□ -2.11
Usf1Q61069 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Usf1Q61069 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Usf1Q61069 Gm23202-201ENSMUST00000104376 129 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm14894-201ENSMUST00000117170 270 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm12779-201ENSMUST00000121496 143 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm15529-201ENSMUST00000121833 994 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm16328-201ENSMUST00000126985 196 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm25961-201ENSMUST00000157174 135 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm23332-201ENSMUST00000157424 275 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm25460-201ENSMUST00000157954 127 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm24901-201ENSMUST00000158125 110 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Mir6901-201ENSMUST00000185062 62 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm28151-201ENSMUST00000189404 951 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Usf1Q61069 Gm37449-201ENSMUST00000193016 270 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm18658-201ENSMUST00000195558 270 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Mir3069-201ENSMUST00000198802 65 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm43708-201ENSMUST00000198857 961 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm7039-201ENSMUST00000205138 346 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Usf1Q61069 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.87□□□□□ -2.11
Usf1Q61069 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Usf1Q61069 Gm24313-201ENSMUST00000082561 133 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm24661-201ENSMUST00000083205 104 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Gm25859-201ENSMUST00000083710 91 ntBASIC1.87□□□□□ -2.11
Usf1Q61069 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Usf1Q61069 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Usf1Q61069 Gm13378-201ENSMUST00000117483 336 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm26102-201ENSMUST00000157251 284 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm25339-201ENSMUST00000157458 232 ntBASIC1.86□□□□□ -2.11
Usf1Q61069 Gm22083-201ENSMUST00000157586 102 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms