Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC5.13□□□□□ -1.59
Scaf1Q5U4C3 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 Gm21960-201ENSMUST00000181924 452 ntBASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 Gm42739-201ENSMUST00000200687 226 ntBASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 Gm35405-201ENSMUST00000218754 400 ntBASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 AC160865.1-201ENSMUST00000219873 151 ntBASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 AC161758.2-201ENSMUST00000228513 218 ntBASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 Gm45176-201ENSMUST00000207696 4096 ntBASIC5.12□□□□□ -1.59
Scaf1Q5U4C3 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Gm23578-201ENSMUST00000103943 104 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Gm23653-201ENSMUST00000116751 97 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Gm22286-201ENSMUST00000179708 107 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Gm27392-201ENSMUST00000185041 101 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Gm29022-201ENSMUST00000190702 225 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Gm44343-201ENSMUST00000196702 90 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Mir28a-201ENSMUST00000083560 86 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Gm43486-201ENSMUST00000196431 4339 ntBASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Scaf1Q5U4C3 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Gm45130-201ENSMUST00000207574 3388 ntBASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 AC153150.1-201ENSMUST00000226065 3782 ntBASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Gm5937-201ENSMUST00000119715 643 ntBASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Gm23084-201ENSMUST00000157850 114 ntBASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Gm24846-201ENSMUST00000158033 108 ntBASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Gm27476-201ENSMUST00000183366 104 ntBASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Gm45687-201ENSMUST00000209454 155 ntBASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
Scaf1Q5U4C3 Gm44120-201ENSMUST00000203022 3023 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Gm24982-201ENSMUST00000104456 132 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Gm25727-201ENSMUST00000104522 131 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Gm26026-201ENSMUST00000122726 123 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Gm26279-201ENSMUST00000157095 102 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Gm25615-201ENSMUST00000177836 94 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Gm23933-201ENSMUST00000178405 79 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Gm20058-201ENSMUST00000186939 284 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Gm18015-201ENSMUST00000214879 316 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Snord82-201ENSMUST00000082889 70 ntBASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Scaf1Q5U4C3 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.6
Scaf1Q5U4C3 Gm44842-201ENSMUST00000209173 3372 ntBASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Gm23202-201ENSMUST00000104376 129 ntBASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Gm22538-201ENSMUST00000158169 299 ntBASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Gm22840-201ENSMUST00000158444 136 ntBASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Mir7667-201ENSMUST00000183866 63 ntBASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Mir3068-202ENSMUST00000197755 79 ntBASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Snora7a-201ENSMUST00000082629 140 ntBASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Scaf1Q5U4C3 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm14448-201ENSMUST00000116383 210 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm24553-201ENSMUST00000158653 131 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm24878-201ENSMUST00000158782 104 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm26460-201ENSMUST00000175061 126 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm17067-202ENSMUST00000180131 123 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm43220-201ENSMUST00000199299 282 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm25930-201ENSMUST00000082785 107 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm24204-201ENSMUST00000082950 107 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm26495-201ENSMUST00000083152 137 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm25480-201ENSMUST00000083217 133 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Gm37479-201ENSMUST00000194169 3841 ntBASIC5.07□□□□□ -1.6
Scaf1Q5U4C3 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Gm13831-201ENSMUST00000118764 302 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Gm26027-201ENSMUST00000122725 268 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Gm23476-201ENSMUST00000158881 274 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Gm4468-201ENSMUST00000170206 294 ntBASIC5.06□□□□□ -1.6
Scaf1Q5U4C3 Gm27465-201ENSMUST00000184290 91 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 147.1 ms