Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Trbv6-201ENSMUST00000193743 276 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Mir7215-201ENSMUST00000200383 51 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm44794-201ENSMUST00000206550 411 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 AL669916.3-201ENSMUST00000213855 94 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 AL669916.6-201ENSMUST00000214610 94 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 AL669916.4-201ENSMUST00000215976 94 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 AL669916.1-201ENSMUST00000217640 94 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Mir221-201ENSMUST00000083488 95 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.48□□□□□ -2.17
Ccdc88aQ5SNZ0 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm14594-201ENSMUST00000118052 537 ntBASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm14590-201ENSMUST00000118934 537 ntBASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm23752-201ENSMUST00000157584 115 ntBASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm17154-201ENSMUST00000165748 431 ntBASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm23933-201ENSMUST00000178405 79 ntBASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm14596-201ENSMUST00000180268 537 ntBASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm14595-201ENSMUST00000180335 537 ntBASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm44254-201ENSMUST00000204184 322 ntBASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 AC168880.1-201ENSMUST00000225113 707 ntBASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Ccdc88aQ5SNZ0 Gm12006-201ENSMUST00000120786 403 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm22945-201ENSMUST00000158557 157 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm25768-201ENSMUST00000158570 98 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm23568-201ENSMUST00000177960 92 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm24829-201ENSMUST00000179245 92 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm24518-201ENSMUST00000180275 94 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm5116-201ENSMUST00000187732 463 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm29627-201ENSMUST00000187984 463 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm38268-201ENSMUST00000195813 193 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm24445-201ENSMUST00000083981 107 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm25563-201ENSMUST00000104603 74 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm14359-201ENSMUST00000118883 424 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm14360-201ENSMUST00000120670 393 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm16428-201ENSMUST00000121193 723 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm9498-201ENSMUST00000140849 291 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm17113-201ENSMUST00000170118 171 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm24137-201ENSMUST00000180055 79 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm22391-201ENSMUST00000180356 79 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm5224-201ENSMUST00000183060 350 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm37709-201ENSMUST00000195074 600 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm45071-201ENSMUST00000205353 571 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm45387-201ENSMUST00000209792 632 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm26437-201ENSMUST00000082595 105 ntBASIC1.46□□□□□ -2.18
Ccdc88aQ5SNZ0 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm23981-201ENSMUST00000157136 106 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm22037-201ENSMUST00000157280 296 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Mir6382-201ENSMUST00000184055 110 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm43286-201ENSMUST00000197420 424 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm45101-201ENSMUST00000208327 232 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm45288-201ENSMUST00000210236 151 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm9318-201ENSMUST00000222444 438 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Olfr197-201ENSMUST00000080031 926 ntBASIC1.45□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm25506-201ENSMUST00000104339 70 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm4732-201ENSMUST00000118778 473 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm12309-201ENSMUST00000119889 182 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Mir1942-201ENSMUST00000157274 63 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Mir6376-201ENSMUST00000185149 131 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm44459-201ENSMUST00000203926 160 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm23645-201ENSMUST00000083228 108 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm26327-201ENSMUST00000093724 111 ntBASIC1.44□□□□□ -2.18
Ccdc88aQ5SNZ0 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Ccdc88aQ5SNZ0 Mir873a-201ENSMUST00000104863 77 ntBASIC1.43□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm14932-201ENSMUST00000117112 453 ntBASIC1.43□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm12872-201ENSMUST00000121835 320 ntBASIC1.43□□□□□ -2.18
Ccdc88aQ5SNZ0 Gm14713-201ENSMUST00000122362 686 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms