Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 Gm36966-201ENSMUST00000192217 413 ntBASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 Gm42774-201ENSMUST00000198854 283 ntBASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 Gm21937-201ENSMUST00000222825 218 ntBASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 AC113031.5-201ENSMUST00000227116 606 ntBASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 Gm22062-201ENSMUST00000082563 107 ntBASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 Gm23245-201ENSMUST00000083370 135 ntBASIC1.03□□□□□ -2.24
Trav5d-4Q5R1F6 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.03□□□□□ -2.25
Trav5d-4Q5R1F6 Gm24079-201ENSMUST00000104352 132 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm26147-201ENSMUST00000104479 114 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm6664-201ENSMUST00000119138 468 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm25115-201ENSMUST00000157187 140 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm22765-201ENSMUST00000158371 128 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Traj60-201ENSMUST00000167781 54 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Mir3964-201ENSMUST00000174898 74 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm22716-201ENSMUST00000177596 107 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm28794-201ENSMUST00000185276 136 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm18357-201ENSMUST00000188184 580 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm43583-201ENSMUST00000199235 303 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Olfr1285-201ENSMUST00000208523 903 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 AC121114.1-201ENSMUST00000228522 570 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Gm25636-201ENSMUST00000082666 133 ntBASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Trav5d-4Q5R1F6 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Gm14558-201ENSMUST00000117458 381 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Mup-ps14-201ENSMUST00000118437 532 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Gm12639-201ENSMUST00000121400 493 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Mup-ps2-201ENSMUST00000142602 533 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Gm44320-201ENSMUST00000199276 86 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Gm44654-201ENSMUST00000208052 329 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Gm22980-201ENSMUST00000082608 70 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Gm26493-201ENSMUST00000083155 136 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.01□□□□□ -2.25
Trav5d-4Q5R1F6 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm42862-201ENSMUST00000197494 2621 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm14554-201ENSMUST00000119548 661 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm25325-201ENSMUST00000122559 86 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Mir1967-201ENSMUST00000157789 82 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm24997-201ENSMUST00000157910 105 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm22537-201ENSMUST00000158172 199 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm22075-201ENSMUST00000158599 192 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm21754-201ENSMUST00000177550 479 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm44482-201ENSMUST00000199232 103 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Mir3087-201ENSMUST00000199405 56 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm31230-201ENSMUST00000199725 785 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 AC102352.1-201ENSMUST00000224187 582 ntBASIC1□□□□□ -2.25
Trav5d-4Q5R1F6 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm13672-201ENSMUST00000117554 459 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm15443-201ENSMUST00000118947 820 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm11606-201ENSMUST00000120706 617 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm23032-201ENSMUST00000157995 107 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm22074-201ENSMUST00000158595 113 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm22800-201ENSMUST00000175627 94 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm4076-201ENSMUST00000179230 965 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm28666-201ENSMUST00000186649 274 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 AC116726.2-201ENSMUST00000217629 986 ntBASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC0.99□□□□□ -2.25
Trav5d-4Q5R1F6 AC153950.1-201ENSMUST00000219916 3238 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Gm12370-201ENSMUST00000117809 604 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Gm25294-201ENSMUST00000122791 104 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Gm24885-201ENSMUST00000158783 270 ntBASIC0.98□□□□□ -2.25
Trav5d-4Q5R1F6 Gm23196-201ENSMUST00000158806 107 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms