Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir743b-201ENSMUST00000104751 77 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Gm12765-201ENSMUST00000117273 615 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Mir1942-201ENSMUST00000157274 63 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Gm24780-201ENSMUST00000157635 143 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Gm24498-201ENSMUST00000158445 102 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Mir6370-201ENSMUST00000183510 120 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Mir7678-201ENSMUST00000185076 71 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Gm29350-201ENSMUST00000189141 541 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.99□□□□□ -2.09
Usp28Q5I043 Gm9236-201ENSMUST00000196892 587 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC1.99□□□□□ -2.09
Usp28Q5I043 Gm42739-201ENSMUST00000200687 226 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Olfr197-201ENSMUST00000080031 926 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
Usp28Q5I043 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.99□□□□□ -2.09
Usp28Q5I043 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Usp28Q5I043 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Usp28Q5I043 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm15714-201ENSMUST00000117168 250 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm15183-201ENSMUST00000118933 348 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm15497-201ENSMUST00000119137 551 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm11522-201ENSMUST00000120533 176 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm24911-201ENSMUST00000157292 136 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm23548-201ENSMUST00000158963 106 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Cfap61-214ENSMUST00000167179 183 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm24572-201ENSMUST00000175505 88 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm23725-201ENSMUST00000177876 107 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm27385-201ENSMUST00000184747 104 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Trbv6-201ENSMUST00000193743 276 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm43529-201ENSMUST00000199178 412 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm8125-201ENSMUST00000216602 738 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm22443-201ENSMUST00000082890 107 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Gm22577-201ENSMUST00000083731 109 ntBASIC1.98□□□□□ -2.09
Usp28Q5I043 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Usp28Q5I043 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm26077-201ENSMUST00000104064 123 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm14823-201ENSMUST00000117698 238 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm14392-201ENSMUST00000120332 401 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm14413-201ENSMUST00000122158 408 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm23184-201ENSMUST00000122594 131 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm23752-201ENSMUST00000157584 115 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Mir5118-201ENSMUST00000175551 67 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm27761-201ENSMUST00000184091 131 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm28925-201ENSMUST00000188586 168 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm37455-201ENSMUST00000191993 529 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm5001-201ENSMUST00000204361 331 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm8940-201ENSMUST00000212585 219 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm23517-201ENSMUST00000082830 192 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.97□□□□□ -2.09
Usp28Q5I043 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Usp28Q5I043 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
Usp28Q5I043 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Usp28Q5I043 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm11471-201ENSMUST00000121824 198 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm25279-201ENSMUST00000122608 133 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm14364-201ENSMUST00000129209 267 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm23000-201ENSMUST00000157083 139 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm23332-201ENSMUST00000157424 275 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm24056-201ENSMUST00000158617 146 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm24878-201ENSMUST00000158782 104 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Usp28Q5I043 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm26335-201ENSMUST00000178449 107 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm28927-201ENSMUST00000191528 272 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm43007-201ENSMUST00000197618 291 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm44336-201ENSMUST00000203696 468 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm19118-201ENSMUST00000222554 98 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm23515-201ENSMUST00000082829 107 ntBASIC1.96□□□□□ -2.1
Usp28Q5I043 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Usp28Q5I043 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Usp28Q5I043 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm26105-201ENSMUST00000157253 190 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm23324-201ENSMUST00000157421 131 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm18588-201ENSMUST00000177308 492 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm6660-201ENSMUST00000179149 468 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm29231-201ENSMUST00000179850 319 ntBASIC1.95□□□□□ -2.1
Usp28Q5I043 Gm23523-201ENSMUST00000180190 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms