Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm23559-201ENSMUST00000157824 103 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm22522-201ENSMUST00000158271 151 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm23205-201ENSMUST00000158671 103 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm20794-201ENSMUST00000177626 628 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm28356-202ENSMUST00000187566 858 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm20885-201ENSMUST00000190192 654 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm33571-201ENSMUST00000193271 657 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm36866-201ENSMUST00000193343 657 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm36047-201ENSMUST00000193659 657 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm20857-201ENSMUST00000194766 657 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm20858-201ENSMUST00000195459 657 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm30638-201ENSMUST00000195570 656 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 AC165106.2-201ENSMUST00000226749 97 ntBASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
Ccdc88bQ4QRL3 Gm14785-201ENSMUST00000120185 539 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 Gm15037-201ENSMUST00000120358 259 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 Gm24296-201ENSMUST00000158297 106 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 Gm24549-201ENSMUST00000158647 139 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 Gm17528-201ENSMUST00000171026 239 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 Gm27660-201ENSMUST00000184028 208 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 Gm18645-201ENSMUST00000209593 651 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 CT030645.1-201ENSMUST00000224020 231 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 AC115878.1-201ENSMUST00000227247 334 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 Gm24622-201ENSMUST00000082619 162 ntBASIC0.25□□□□□ -2.37
Ccdc88bQ4QRL3 Gm11483-201ENSMUST00000119839 247 ntBASIC0.24□□□□□ -2.37
Ccdc88bQ4QRL3 Gm14360-201ENSMUST00000120670 393 ntBASIC0.24□□□□□ -2.37
Ccdc88bQ4QRL3 Gm27735-201ENSMUST00000185085 76 ntBASIC0.24□□□□□ -2.37
Ccdc88bQ4QRL3 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.24□□□□□ -2.37
Ccdc88bQ4QRL3 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
Ccdc88bQ4QRL3 Gm23229-201ENSMUST00000157297 105 ntBASIC0.23□□□□□ -2.37
Ccdc88bQ4QRL3 Gm24959-201ENSMUST00000157924 146 ntBASIC0.23□□□□□ -2.37
Ccdc88bQ4QRL3 Gm22382-201ENSMUST00000158185 130 ntBASIC0.23□□□□□ -2.37
Ccdc88bQ4QRL3 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.23□□□□□ -2.37
Ccdc88bQ4QRL3 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.23□□□□□ -2.37
Ccdc88bQ4QRL3 Gm26338-201ENSMUST00000102372 110 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm22208-201ENSMUST00000122658 110 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm37979-201ENSMUST00000193065 712 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm42509-201ENSMUST00000197390 781 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 AC154296.1-201ENSMUST00000198150 67 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm44654-201ENSMUST00000208052 329 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm11367-201ENSMUST00000117802 120 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm22942-201ENSMUST00000158563 124 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm23415-201ENSMUST00000175519 83 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Gm45658-201ENSMUST00000209197 580 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 AC122465.3-201ENSMUST00000221644 355 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 CT030166.1-201ENSMUST00000222654 357 ntBASIC0.22□□□□□ -2.37
Ccdc88bQ4QRL3 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Ccdc88bQ4QRL3 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.21□□□□□ -2.38
Ccdc88bQ4QRL3 Gm22817-201ENSMUST00000157448 356 ntBASIC0.21□□□□□ -2.38
Ccdc88bQ4QRL3 Gm22233-201ENSMUST00000157464 114 ntBASIC0.21□□□□□ -2.38
Ccdc88bQ4QRL3 Gm25868-201ENSMUST00000158253 114 ntBASIC0.21□□□□□ -2.38
Ccdc88bQ4QRL3 Gm37713-201ENSMUST00000191746 198 ntBASIC0.21□□□□□ -2.38
Ccdc88bQ4QRL3 Gm36956-201ENSMUST00000193830 214 ntBASIC0.21□□□□□ -2.38
Ccdc88bQ4QRL3 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.21□□□□□ -2.38
Ccdc88bQ4QRL3 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Ccdc88bQ4QRL3 Gm23203-201ENSMUST00000104374 107 ntBASIC0.2□□□□□ -2.38
Ccdc88bQ4QRL3 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Ccdc88bQ4QRL3 Mir362-201ENSMUST00000093592 65 ntBASIC0.2□□□□□ -2.38
Ccdc88bQ4QRL3 Gm26074-201ENSMUST00000104063 129 ntBASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm24468-201ENSMUST00000104489 104 ntBASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm14669-201ENSMUST00000118841 250 ntBASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm21815-201ENSMUST00000178213 664 ntBASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Mir7683-201ENSMUST00000183842 61 ntBASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm28843-201ENSMUST00000189198 678 ntBASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm29546-201ENSMUST00000191171 678 ntBASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm29740-201ENSMUST00000193182 655 ntBASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm24256-201ENSMUST00000083696 84 ntBASIC0.19□□□□□ -2.38
Ccdc88bQ4QRL3 Gm16354-201ENSMUST00000155376 150 ntBASIC0.18□□□□□ -2.38
Ccdc88bQ4QRL3 Gm25666-201ENSMUST00000157702 107 ntBASIC0.18□□□□□ -2.38
Ccdc88bQ4QRL3 Gm24963-201ENSMUST00000157916 144 ntBASIC0.18□□□□□ -2.38
Ccdc88bQ4QRL3 Gm16147-201ENSMUST00000162143 373 ntBASIC0.18□□□□□ -2.38
Ccdc88bQ4QRL3 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.18□□□□□ -2.38
Ccdc88bQ4QRL3 Gm45023-201ENSMUST00000207951 379 ntBASIC0.18□□□□□ -2.38
Ccdc88bQ4QRL3 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.18□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms