Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm28223-201ENSMUST00000190469 315 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm28951-201ENSMUST00000190742 313 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm29092-201ENSMUST00000190768 315 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm38050-201ENSMUST00000191904 238 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm37104-201ENSMUST00000193278 196 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm32033-201ENSMUST00000193483 339 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm30534-201ENSMUST00000217928 207 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm2436-201ENSMUST00000219562 774 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm46389-201ENSMUST00000223199 392 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm24313-201ENSMUST00000082561 133 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm26056-201ENSMUST00000083043 104 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm24043-201ENSMUST00000083108 116 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm22866-201ENSMUST00000083947 177 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm25628-201ENSMUST00000084002 105 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Gm25207-201ENSMUST00000093745 107 ntBASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Trim40Q3UWA4 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trim40Q3UWA4 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm13862-201ENSMUST00000121220 197 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm16218-201ENSMUST00000155424 388 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm22792-201ENSMUST00000157225 133 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm22083-201ENSMUST00000157586 102 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm25162-201ENSMUST00000158906 159 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm24304-201ENSMUST00000177635 107 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm26501-201ENSMUST00000178307 107 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm26180-201ENSMUST00000179942 107 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm28825-201ENSMUST00000186233 238 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm37361-201ENSMUST00000194345 132 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm34073-201ENSMUST00000195736 212 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm43723-201ENSMUST00000196886 189 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm34783-201ENSMUST00000209159 303 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm17990-201ENSMUST00000211728 553 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.25□□□□□ -2.05
Trim40Q3UWA4 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Olfr197-201ENSMUST00000080031 926 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Trim40Q3UWA4 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.25□□□□□ -2.05
Trim40Q3UWA4 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm7164-201ENSMUST00000117503 450 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm13903-201ENSMUST00000120945 193 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm14287-201ENSMUST00000121060 117 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm23865-201ENSMUST00000157723 97 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm22554-201ENSMUST00000157798 147 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm22328-201ENSMUST00000158074 112 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm27510-201ENSMUST00000158214 64 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm26159-201ENSMUST00000158968 104 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm23191-201ENSMUST00000179147 107 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm27761-201ENSMUST00000184091 131 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Mir195b-201ENSMUST00000184814 97 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm43286-201ENSMUST00000197420 424 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm42739-201ENSMUST00000200687 226 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm22620-201ENSMUST00000082700 133 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm24044-201ENSMUST00000083107 156 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm25578-201ENSMUST00000083406 104 ntBASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
Trim40Q3UWA4 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm24127-201ENSMUST00000104110 130 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm15497-201ENSMUST00000119137 551 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm14588-201ENSMUST00000119895 172 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm13443-201ENSMUST00000120770 555 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm12819-201ENSMUST00000122223 629 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm23641-201ENSMUST00000157857 101 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm22389-201ENSMUST00000158193 301 ntBASIC2.23□□□□□ -2.05
Trim40Q3UWA4 Gm24878-201ENSMUST00000158782 104 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms