Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm38238-201ENSMUST00000194334 346 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm9377-201ENSMUST00000207227 623 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 AC116465.1-201ENSMUST00000220324 235 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Gm23727-201ENSMUST00000083352 164 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Snord14d-201ENSMUST00000083424 86 ntBASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Trafd1Q3UDK1 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm13355-201ENSMUST00000117996 317 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm23752-201ENSMUST00000157584 115 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Mir5101-201ENSMUST00000175181 83 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm22131-201ENSMUST00000178415 94 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm26180-201ENSMUST00000179942 107 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm26968-201ENSMUST00000182894 481 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm28000-201ENSMUST00000184380 85 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm27624-201ENSMUST00000185047 177 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Mir8090-201ENSMUST00000185078 136 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm27588-201ENSMUST00000185096 263 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm37377-201ENSMUST00000191733 304 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm45815-201ENSMUST00000220241 146 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Gm26166-201ENSMUST00000083788 107 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.16□□□□□ -2.06
Trafd1Q3UDK1 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trafd1Q3UDK1 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
Trafd1Q3UDK1 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm22779-201ENSMUST00000104085 107 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm26396-201ENSMUST00000104093 132 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Mir669d-201ENSMUST00000104644 121 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm13806-201ENSMUST00000117822 325 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm15844-201ENSMUST00000118016 576 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm13876-201ENSMUST00000118451 261 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm23196-201ENSMUST00000158806 107 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm17148-201ENSMUST00000164702 249 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm17062-201ENSMUST00000166987 461 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm24862-201ENSMUST00000179103 79 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm23310-201ENSMUST00000179105 79 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm25461-201ENSMUST00000179293 79 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm25820-202ENSMUST00000197479 128 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm43007-201ENSMUST00000197618 291 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm43529-201ENSMUST00000199178 412 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm44149-201ENSMUST00000204256 226 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 CT009718.4-201ENSMUST00000221881 109 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Snora69-201ENSMUST00000083708 131 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Gm25207-201ENSMUST00000093745 107 ntBASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trafd1Q3UDK1 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm11556-201ENSMUST00000120751 288 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm25970-201ENSMUST00000157165 86 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Mir1942-201ENSMUST00000157274 63 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm24577-201ENSMUST00000158580 63 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm6788-201ENSMUST00000166459 270 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm29352-201ENSMUST00000188054 544 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm43723-201ENSMUST00000196886 189 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm43083-201ENSMUST00000199594 476 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm45730-201ENSMUST00000212560 395 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm25135-201ENSMUST00000082648 143 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm23517-201ENSMUST00000082830 192 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Gm26327-201ENSMUST00000093724 111 ntBASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trafd1Q3UDK1 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
Trafd1Q3UDK1 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.13□□□□□ -2.07
Trafd1Q3UDK1 Gm23713-201ENSMUST00000157353 70 ntBASIC2.13□□□□□ -2.07
Trafd1Q3UDK1 Gm22080-201ENSMUST00000157591 106 ntBASIC2.13□□□□□ -2.07
Trafd1Q3UDK1 Gm24409-201ENSMUST00000157881 152 ntBASIC2.13□□□□□ -2.07
Trafd1Q3UDK1 Gm22615-201ENSMUST00000158102 70 ntBASIC2.13□□□□□ -2.07
Trafd1Q3UDK1 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.13□□□□□ -2.07
Trafd1Q3UDK1 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.13□□□□□ -2.07
Trafd1Q3UDK1 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms