Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm25698-201ENSMUST00000082897 107 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm26066-201ENSMUST00000083385 109 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.73□□□□□ -1.81
Ddb1Q3U1J4 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm25529-201ENSMUST00000104850 92 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Mir466k-201ENSMUST00000116774 122 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm14551-201ENSMUST00000120802 256 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm22227-201ENSMUST00000157356 259 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm23262-201ENSMUST00000158323 168 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm25642-201ENSMUST00000175137 66 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Mir5123-201ENSMUST00000177794 83 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm37338-201ENSMUST00000191986 127 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm44844-201ENSMUST00000207242 336 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm18921-201ENSMUST00000221798 366 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 AC170600.1-201ENSMUST00000228763 277 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Gm42755-201ENSMUST00000198533 1493 ntBASIC3.72□□□□□ -1.81
Ddb1Q3U1J4 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm25466-201ENSMUST00000103995 132 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm7123-201ENSMUST00000117647 213 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm9850-201ENSMUST00000117916 227 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm25107-201ENSMUST00000122472 129 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm24937-201ENSMUST00000122597 134 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm24885-201ENSMUST00000158783 270 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm22621-201ENSMUST00000179678 74 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Mir7013-201ENSMUST00000183540 72 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm19202-201ENSMUST00000198096 808 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Mir496a-201ENSMUST00000093627 79 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ddb1Q3U1J4 Gm8260-201ENSMUST00000119230 353 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm12785-201ENSMUST00000122052 172 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm24481-201ENSMUST00000157210 102 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm23704-201ENSMUST00000158844 340 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Mir6346-201ENSMUST00000183982 81 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm6615-201ENSMUST00000199426 631 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Mir7227-201ENSMUST00000200408 59 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm43415-201ENSMUST00000201934 750 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm45616-201ENSMUST00000211711 319 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm9318-201ENSMUST00000222444 438 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm22806-201ENSMUST00000082738 136 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm25793-201ENSMUST00000083287 107 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm23850-201ENSMUST00000083830 169 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm22353-201ENSMUST00000083918 136 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Gm42639-201ENSMUST00000197061 1871 ntBASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ddb1Q3U1J4 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm12782-201ENSMUST00000117519 727 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm14593-201ENSMUST00000119948 294 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm12617-201ENSMUST00000121268 381 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm14629-201ENSMUST00000122428 144 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm23183-201ENSMUST00000122595 323 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 DQ267100-201ENSMUST00000122600 72 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm25162-201ENSMUST00000158906 159 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm29512-201ENSMUST00000185544 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28110-201ENSMUST00000185782 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28838-201ENSMUST00000186338 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm29057-201ENSMUST00000186468 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm29661-201ENSMUST00000186781 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28737-201ENSMUST00000186808 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm29118-201ENSMUST00000186908 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28433-201ENSMUST00000187085 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm29635-201ENSMUST00000187221 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28759-201ENSMUST00000187621 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28831-201ENSMUST00000187739 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28200-201ENSMUST00000187778 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm29026-201ENSMUST00000187787 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28752-201ENSMUST00000188340 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28797-201ENSMUST00000188543 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm28855-201ENSMUST00000188680 315 ntBASIC3.69□□□□□ -1.82
Ddb1Q3U1J4 Gm29378-201ENSMUST00000188723 315 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 195.2 ms