Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm16005-201ENSMUST00000120515 269 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm25967-201ENSMUST00000157168 147 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm24720-201ENSMUST00000157518 166 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm26088-201ENSMUST00000157896 131 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm26001-201ENSMUST00000157989 103 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm24727-201ENSMUST00000158231 144 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm26141-201ENSMUST00000175299 126 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm29574-201ENSMUST00000186226 696 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.23□□□□□ -1.89
Col8a1Q00780 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.23□□□□□ -1.89
Col8a1Q00780 Mir7682-201ENSMUST00000198467 58 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm43746-201ENSMUST00000200028 317 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm17887-201ENSMUST00000200194 547 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm2189-201ENSMUST00000201419 429 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm44084-201ENSMUST00000203947 409 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col8a1Q00780 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
Col8a1Q00780 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col8a1Q00780 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col8a1Q00780 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm37478-201ENSMUST00000193624 3495 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col8a1Q00780 Gm21940-201ENSMUST00000204940 2278 ntBASIC3.23□□□□□ -1.89
Col8a1Q00780 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col8a1Q00780 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Col8a1Q00780 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Col8a1Q00780 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col8a1Q00780 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col8a1Q00780 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col8a1Q00780 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col8a1Q00780 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col8a1Q00780 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm15497-201ENSMUST00000119137 551 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm11704-201ENSMUST00000120031 214 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm23641-201ENSMUST00000157857 101 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm25490-201ENSMUST00000158734 130 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm23196-201ENSMUST00000158806 107 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm16404-201ENSMUST00000177739 468 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm6660-201ENSMUST00000179149 468 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm14598-201ENSMUST00000180109 468 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm14625-201ENSMUST00000180231 468 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Ighv15-1-201ENSMUST00000194450 276 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm44393-201ENSMUST00000197418 138 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm43220-201ENSMUST00000199299 282 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm44563-201ENSMUST00000207958 178 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm8274-201ENSMUST00000219820 463 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm25930-201ENSMUST00000082785 107 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.22□□□□□ -1.89
Col8a1Q00780 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.22□□□□□ -1.89
Col8a1Q00780 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.22□□□□□ -1.89
Col8a1Q00780 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.21□□□□□ -1.89
Col8a1Q00780 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.21□□□□□ -1.89
Col8a1Q00780 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.21□□□□□ -1.89
Col8a1Q00780 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Col8a1Q00780 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col8a1Q00780 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm24318-201ENSMUST00000104490 131 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm15180-201ENSMUST00000117745 492 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm12304-201ENSMUST00000120312 385 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col8a1Q00780 Mir1966-201ENSMUST00000158807 108 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Mir5098-201ENSMUST00000175320 82 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm22699-201ENSMUST00000175376 105 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm6625-201ENSMUST00000177870 272 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Mir6338-201ENSMUST00000183389 109 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm38332-201ENSMUST00000194189 147 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col8a1Q00780 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm25205-201ENSMUST00000082841 103 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm25480-201ENSMUST00000083217 133 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col8a1Q00780 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col8a1Q00780 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.21□□□□□ -1.9
Col8a1Q00780 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col8a1Q00780 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col8a1Q00780 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.2□□□□□ -1.9
Col8a1Q00780 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col8a1Q00780 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm26293-201ENSMUST00000104170 84 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm24282-201ENSMUST00000104232 66 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm24067-201ENSMUST00000104514 85 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm13314-201ENSMUST00000118742 335 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm5396-201ENSMUST00000121222 532 ntBASIC3.2□□□□□ -1.9
Col8a1Q00780 Gm22215-201ENSMUST00000157558 96 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 380.8 ms