Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.55□□□□□ -2.16
Shox2P70390 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.55□□□□□ -2.16
Shox2P70390 Gm23517-201ENSMUST00000082830 192 ntBASIC1.55□□□□□ -2.16
Shox2P70390 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Shox2P70390 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.55□□□□□ -2.16
Shox2P70390 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Shox2P70390 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Shox2P70390 Gm25088-201ENSMUST00000101803 79 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm25563-201ENSMUST00000104603 74 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Shox2P70390 Gm23118-201ENSMUST00000122657 187 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm15878-201ENSMUST00000127561 306 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm23381-201ENSMUST00000157676 94 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm26652-202ENSMUST00000181672 475 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm5116-201ENSMUST00000187732 463 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm29627-201ENSMUST00000187984 463 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm45730-201ENSMUST00000212560 395 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm22810-201ENSMUST00000082741 158 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm24406-201ENSMUST00000083026 128 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Mir29c-201ENSMUST00000083614 88 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Shox2P70390 Gm44821-201ENSMUST00000208212 2002 ntBASIC1.54□□□□□ -2.16
Shox2P70390 Gm26002-201ENSMUST00000101915 107 ntBASIC1.53□□□□□ -2.16
Shox2P70390 Mdga2-203ENSMUST00000113942 423 ntBASIC1.53□□□□□ -2.16
Shox2P70390 Gm12432-201ENSMUST00000119540 186 ntBASIC1.53□□□□□ -2.16
Shox2P70390 Gm24895-201ENSMUST00000122742 74 ntBASIC1.53□□□□□ -2.16
Shox2P70390 Gm22038-201ENSMUST00000157277 242 ntBASIC1.53□□□□□ -2.16
Shox2P70390 Gm2855-201ENSMUST00000166765 456 ntBASIC1.53□□□□□ -2.16
Shox2P70390 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC1.53□□□□□ -2.16
Shox2P70390 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Shox2P70390 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Shox2P70390 Trbv24-201ENSMUST00000194614 347 ntBASIC1.53□□□□□ -2.16
Shox2P70390 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Shox2P70390 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.53□□□□□ -2.16
Shox2P70390 Gm44615-201ENSMUST00000206548 358 ntBASIC1.53□□□□□ -2.16
Shox2P70390 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC1.53□□□□□ -2.16
Shox2P70390 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.53□□□□□ -2.16
Shox2P70390 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.53□□□□□ -2.16
Shox2P70390 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.53□□□□□ -2.16
Shox2P70390 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.53□□□□□ -2.16
Shox2P70390 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.53□□□□□ -2.16
Shox2P70390 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.53□□□□□ -2.16
Shox2P70390 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Shox2P70390 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm12106-201ENSMUST00000116006 1200 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm15115-201ENSMUST00000121145 264 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm6568-201ENSMUST00000122274 697 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Shox2P70390 Gm23713-201ENSMUST00000157353 70 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm22615-201ENSMUST00000158102 70 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm2966-201ENSMUST00000166052 481 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm17054-201ENSMUST00000169811 259 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm25361-201ENSMUST00000179358 76 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm42805-201ENSMUST00000196158 276 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm44458-201ENSMUST00000196594 143 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm42807-201ENSMUST00000200141 329 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm44011-201ENSMUST00000203336 394 ntBASIC1.52□□□□□ -2.17
Shox2P70390 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Mir151-201ENSMUST00000083678 68 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Gm24445-201ENSMUST00000083981 107 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Shox2P70390 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Shox2P70390 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Shox2P70390 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.52□□□□□ -2.17
Shox2P70390 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.52□□□□□ -2.17
Shox2P70390 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Shox2P70390 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Shox2P70390 Gm26080-201ENSMUST00000104069 131 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm14558-201ENSMUST00000117458 381 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm15110-201ENSMUST00000117545 881 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Mir1942-201ENSMUST00000157274 63 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm22228-201ENSMUST00000157364 101 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm22389-201ENSMUST00000158193 301 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm26024-201ENSMUST00000158657 322 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Shox2P70390 Gm17085-201ENSMUST00000165425 502 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm25994-201ENSMUST00000175392 101 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm22716-201ENSMUST00000177596 107 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm24464-201ENSMUST00000179697 107 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm29231-201ENSMUST00000179850 319 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Mir6352-201ENSMUST00000184495 116 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
Shox2P70390 Mir3068-202ENSMUST00000197755 79 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.51□□□□□ -2.17
Shox2P70390 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.51□□□□□ -2.17
Shox2P70390 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.51□□□□□ -2.17
Shox2P70390 AC154506.3-201ENSMUST00000225417 213 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Shox2P70390 Gm22683-201ENSMUST00000082854 137 ntBASIC1.51□□□□□ -2.17
Shox2P70390 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Shox2P70390 Gm26301-201ENSMUST00000104813 95 ntBASIC1.5□□□□□ -2.17
Shox2P70390 Gm14215-201ENSMUST00000120578 221 ntBASIC1.5□□□□□ -2.17
Shox2P70390 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.5□□□□□ -2.17
Shox2P70390 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.5□□□□□ -2.17
Shox2P70390 Gm14530-201ENSMUST00000122391 333 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms