Protein–RNA interactions for Protein: P59114

Pcif1, Phosphorylated CTD-interacting factor 1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1P59114 Gm25384-201ENSMUST00000157807 105 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Pcif1P59114 Gm27410-201ENSMUST00000183851 115 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 Mir7667-201ENSMUST00000183866 63 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.03□□□□□ -1.92
Pcif1P59114 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.03□□□□□ -1.92
Pcif1P59114 Gm45678-201ENSMUST00000210509 295 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 Olfr197-201ENSMUST00000080031 926 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 Gm23345-201ENSMUST00000083817 150 ntBASIC3.03□□□□□ -1.92
Pcif1P59114 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Pcif1P59114 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
Pcif1P59114 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Pcif1P59114 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Pcif1P59114 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Pcif1P59114 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Pcif1P59114 Gm12934-201ENSMUST00000119221 343 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm12155-201ENSMUST00000121267 160 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm23183-201ENSMUST00000122595 323 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.02□□□□□ -1.93
Pcif1P59114 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.02□□□□□ -1.93
Pcif1P59114 Gm25121-201ENSMUST00000179846 79 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm28717-201ENSMUST00000189950 315 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Trav5d-2-201ENSMUST00000196107 275 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Trav5n-2-201ENSMUST00000197136 275 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm43510-201ENSMUST00000197922 353 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm44468-201ENSMUST00000199516 105 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.02□□□□□ -1.93
Pcif1P59114 Gm44881-201ENSMUST00000205425 367 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm44811-201ENSMUST00000209120 228 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 AC116460.1-201ENSMUST00000219040 313 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm4945-201ENSMUST00000075152 453 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm23247-201ENSMUST00000083373 107 ntBASIC3.02□□□□□ -1.93
Pcif1P59114 Gm26247-201ENSMUST00000116702 91 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm13396-201ENSMUST00000120617 271 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm6956-201ENSMUST00000134724 546 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm24908-201ENSMUST00000157294 127 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm23829-201ENSMUST00000157392 270 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm24291-201ENSMUST00000157633 162 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm22654-201ENSMUST00000157874 105 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm7582-201ENSMUST00000160831 603 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm17117-201ENSMUST00000163665 299 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm24084-201ENSMUST00000175173 137 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm27640-201ENSMUST00000184580 147 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Pcif1P59114 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.01□□□□□ -1.93
Pcif1P59114 Gm43669-201ENSMUST00000198229 436 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Gm43739-201ENSMUST00000198294 307 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Pcif1P59114 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Snord68-201ENSMUST00000082516 86 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.01□□□□□ -1.93
Pcif1P59114 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.01□□□□□ -1.93
Pcif1P59114 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Pcif1P59114 Gm14073-201ENSMUST00000117344 381 ntBASIC3□□□□□ -1.93
Pcif1P59114 Gm13518-201ENSMUST00000120018 233 ntBASIC3□□□□□ -1.93
Pcif1P59114 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3□□□□□ -1.93
Pcif1P59114 Gm23409-201ENSMUST00000158516 237 ntBASIC3□□□□□ -1.93
Pcif1P59114 Gm24082-201ENSMUST00000175175 83 ntBASIC3□□□□□ -1.93
Pcif1P59114 Mir6346-201ENSMUST00000183982 81 ntBASIC3□□□□□ -1.93
Pcif1P59114 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3□□□□□ -1.93
Pcif1P59114 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3□□□□□ -1.93
Pcif1P59114 Gm45288-201ENSMUST00000210236 151 ntBASIC3□□□□□ -1.93
Pcif1P59114 Gm8935-201ENSMUST00000066794 2798 ntBASIC3□□□□□ -1.93
Pcif1P59114 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Pcif1P59114 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Pcif1P59114 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm24122-201ENSMUST00000104107 132 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Mir466k-201ENSMUST00000116774 122 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm25270-201ENSMUST00000122606 138 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.99□□□□□ -1.93
Pcif1P59114 Gm23588-201ENSMUST00000157659 99 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm24601-201ENSMUST00000157970 143 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm22534-201ENSMUST00000158173 104 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm24878-201ENSMUST00000158782 104 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Pcif1P59114 Gm22308-201ENSMUST00000177609 107 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm25284-201ENSMUST00000180345 141 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm27532-201ENSMUST00000183726 113 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Pcif1P59114 Gm42739-201ENSMUST00000200687 226 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.99□□□□□ -1.93
Pcif1P59114 Gm22997-201ENSMUST00000082845 107 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Gm23264-201ENSMUST00000083372 107 ntBASIC2.99□□□□□ -1.93
Pcif1P59114 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Pcif1P59114 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Pcif1P59114 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Pcif1P59114 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.98□□□□□ -1.93
Pcif1P59114 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.98□□□□□ -1.93
Pcif1P59114 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms