Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm2003-201ENSMUST00000118537 636 ntBASIC1.07□□□□□ -2.24
Cux1P53564 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.07□□□□□ -2.24
Cux1P53564 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC1.07□□□□□ -2.24
Cux1P53564 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC1.07□□□□□ -2.24
Cux1P53564 Gm24837-201ENSMUST00000158683 81 ntBASIC1.07□□□□□ -2.24
Cux1P53564 Gm18358-201ENSMUST00000173179 1277 ntBASIC1.07□□□□□ -2.24
Cux1P53564 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Cux1P53564 Gm42807-201ENSMUST00000200141 329 ntBASIC1.07□□□□□ -2.24
Cux1P53564 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.07□□□□□ -2.24
Cux1P53564 Gm18645-201ENSMUST00000209593 651 ntBASIC1.07□□□□□ -2.24
Cux1P53564 Gm45730-201ENSMUST00000212560 395 ntBASIC1.07□□□□□ -2.24
Cux1P53564 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Cux1P53564 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Cux1P53564 Mir223-201ENSMUST00000102112 110 ntBASIC1.06□□□□□ -2.24
Cux1P53564 Mir669f-201ENSMUST00000103850 121 ntBASIC1.06□□□□□ -2.24
Cux1P53564 Gm16038-201ENSMUST00000159317 193 ntBASIC1.06□□□□□ -2.24
Cux1P53564 Gm43250-201ENSMUST00000196536 273 ntBASIC1.06□□□□□ -2.24
Cux1P53564 Gm17991-201ENSMUST00000208139 297 ntBASIC1.06□□□□□ -2.24
Cux1P53564 Gm8219-201ENSMUST00000218309 242 ntBASIC1.06□□□□□ -2.24
Cux1P53564 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Cux1P53564 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
Cux1P53564 Gm23100-201ENSMUST00000083455 141 ntBASIC1.06□□□□□ -2.24
Cux1P53564 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Cux1P53564 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Cux1P53564 Gm25621-201ENSMUST00000157223 114 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm23713-201ENSMUST00000157353 70 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm22615-201ENSMUST00000158102 70 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Snord11-201ENSMUST00000158468 84 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Mir8106-201ENSMUST00000184520 139 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm5329-201ENSMUST00000186898 463 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm38044-201ENSMUST00000192964 487 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.05□□□□□ -2.24
Cux1P53564 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC1.05□□□□□ -2.24
Cux1P53564 Gm23628-201ENSMUST00000082464 173 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm23650-201ENSMUST00000083355 70 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm6956-201ENSMUST00000134724 546 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm24777-201ENSMUST00000157644 107 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Mir3086-201ENSMUST00000175072 87 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm29231-201ENSMUST00000179850 319 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm42739-201ENSMUST00000200687 226 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Gm23246-201ENSMUST00000083371 67 ntBASIC1.05□□□□□ -2.24
Cux1P53564 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
Cux1P53564 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.04□□□□□ -2.24
Cux1P53564 Gm11784-201ENSMUST00000118568 474 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Gm14629-201ENSMUST00000122428 144 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Gm23278-201ENSMUST00000157911 143 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Gm28000-201ENSMUST00000184380 85 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Gm28825-201ENSMUST00000186233 238 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Gm44232-201ENSMUST00000204537 225 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Gm45207-201ENSMUST00000207469 145 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Gm45530-201ENSMUST00000211658 225 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC1.04□□□□□ -2.24
Cux1P53564 AC122901.2-201ENSMUST00000216926 285 ntBASIC1.04□□□□□ -2.24
Cux1P53564 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Gm22443-201ENSMUST00000082890 107 ntBASIC1.04□□□□□ -2.24
Cux1P53564 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Cux1P53564 Mir653-201ENSMUST00000102402 85 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm24582-201ENSMUST00000103967 103 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.03□□□□□ -2.24
Cux1P53564 Gm26000-201ENSMUST00000157991 107 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm24846-201ENSMUST00000158033 108 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm24772-201ENSMUST00000158507 110 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm27878-201ENSMUST00000184000 106 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm37771-201ENSMUST00000193121 265 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm43402-201ENSMUST00000197159 159 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm44391-201ENSMUST00000198490 93 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm43955-201ENSMUST00000204332 142 ntBASIC1.03□□□□□ -2.24
Cux1P53564 AC158388.1-201ENSMUST00000225441 256 ntBASIC1.03□□□□□ -2.24
Cux1P53564 AC131068.1-201ENSMUST00000226891 482 ntBASIC1.03□□□□□ -2.24
Cux1P53564 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
Cux1P53564 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
Cux1P53564 Gm25541-201ENSMUST00000116888 126 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC1.02□□□□□ -2.25
Cux1P53564 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC1.02□□□□□ -2.25
Cux1P53564 Gm28838-201ENSMUST00000186338 315 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm29635-201ENSMUST00000187221 315 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm29026-201ENSMUST00000187787 315 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm28797-201ENSMUST00000188543 315 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm28855-201ENSMUST00000188680 315 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm28705-201ENSMUST00000189548 315 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm28939-201ENSMUST00000190351 315 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm28223-201ENSMUST00000190469 315 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm29092-201ENSMUST00000190768 315 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC1.02□□□□□ -2.25
Cux1P53564 Gm19885-201ENSMUST00000212853 343 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm21937-201ENSMUST00000222825 218 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Gm23245-201ENSMUST00000083370 135 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Mir29c-201ENSMUST00000083614 88 ntBASIC1.02□□□□□ -2.25
Cux1P53564 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Cux1P53564 Gm22663-201ENSMUST00000158721 102 ntBASIC1.01□□□□□ -2.25
Cux1P53564 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Cux1P53564 Gm27028-201ENSMUST00000182303 399 ntBASIC1.01□□□□□ -2.25
Cux1P53564 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.01□□□□□ -2.25
Cux1P53564 Gm42774-201ENSMUST00000198854 283 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms