Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Shmt1P50431 Gm11598-201ENSMUST00000119257 357 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 Gm15223-201ENSMUST00000120989 826 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 Gm22654-201ENSMUST00000157874 105 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 Mir6993-201ENSMUST00000184912 65 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.44□□□□□ -1.86
Shmt1P50431 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.44□□□□□ -1.86
Shmt1P50431 Gm44010-201ENSMUST00000204432 331 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.44□□□□□ -1.86
Shmt1P50431 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 Gm9795-201ENSMUST00000062156 693 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 Mir32-201ENSMUST00000083610 70 ntBASIC3.44□□□□□ -1.86
Shmt1P50431 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Shmt1P50431 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Shmt1P50431 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Shmt1P50431 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Shmt1P50431 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Shmt1P50431 Gm24423-201ENSMUST00000101982 106 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Mir541-201ENSMUST00000102097 90 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Shmt1P50431 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Shmt1P50431 Gm24119-201ENSMUST00000103979 246 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm26423-201ENSMUST00000104277 128 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm25376-201ENSMUST00000104340 133 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm13714-201ENSMUST00000117313 221 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm12417-201ENSMUST00000119153 403 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm22107-201ENSMUST00000122548 100 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm22145-201ENSMUST00000157396 148 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm22538-201ENSMUST00000158169 299 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC3.43□□□□□ -1.86
Shmt1P50431 Gm17528-201ENSMUST00000171026 239 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm24084-201ENSMUST00000175173 137 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm20651-201ENSMUST00000177219 329 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Mir6383-201ENSMUST00000184545 116 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Mir6914-201ENSMUST00000184999 69 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm29657-201ENSMUST00000189807 342 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.43□□□□□ -1.86
Shmt1P50431 Gm18921-201ENSMUST00000221798 366 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Shmt1P50431 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.43□□□□□ -1.86
Shmt1P50431 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.43□□□□□ -1.86
Shmt1P50431 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shmt1P50431 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shmt1P50431 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shmt1P50431 Gm13581-201ENSMUST00000120675 278 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm15190-201ENSMUST00000120855 276 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Defa-ps8-201ENSMUST00000120972 279 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm22984-201ENSMUST00000122751 122 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm24627-201ENSMUST00000122764 138 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm25390-201ENSMUST00000157341 103 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm20542-201ENSMUST00000174582 372 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.42□□□□□ -1.86
Shmt1P50431 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shmt1P50431 Gm27893-201ENSMUST00000184408 194 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm18433-202ENSMUST00000195682 196 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm43899-201ENSMUST00000203675 246 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm44594-201ENSMUST00000208982 407 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm30674-201ENSMUST00000214523 392 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Shmt1P50431 Gm24948-201ENSMUST00000082866 207 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Snora70-201ENSMUST00000083047 137 ntBASIC3.42□□□□□ -1.86
Shmt1P50431 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Shmt1P50431 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
Shmt1P50431 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shmt1P50431 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.42□□□□□ -1.86
Shmt1P50431 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Shmt1P50431 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Shmt1P50431 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Shmt1P50431 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Shmt1P50431 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Shmt1P50431 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Shmt1P50431 Gm23791-201ENSMUST00000122553 293 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm25384-201ENSMUST00000157807 105 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm25490-201ENSMUST00000158734 130 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm26287-201ENSMUST00000158887 81 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm21893-201ENSMUST00000179119 397 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm27783-201ENSMUST00000183534 105 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm27928-201ENSMUST00000183747 256 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm27421-201ENSMUST00000184729 167 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm37431-201ENSMUST00000195102 111 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm22247-201ENSMUST00000082476 131 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm22245-201ENSMUST00000082479 103 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Shmt1P50431 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Shmt1P50431 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.41□□□□□ -1.86
Shmt1P50431 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Shmt1P50431 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Shmt1P50431 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.4□□□□□ -1.87
Shmt1P50431 Gm25308-201ENSMUST00000104171 158 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms