Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm13167-201ENSMUST00000118554 578 ntBASIC4.25□□□□□ -1.73
Rfx1P48377 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.25□□□□□ -1.73
Rfx1P48377 Gm25720-201ENSMUST00000157503 105 ntBASIC4.25□□□□□ -1.73
Rfx1P48377 Gm23589-201ENSMUST00000157660 105 ntBASIC4.25□□□□□ -1.73
Rfx1P48377 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.25□□□□□ -1.73
Rfx1P48377 Mir713-201ENSMUST00000178651 108 ntBASIC4.25□□□□□ -1.73
Rfx1P48377 Gm27540-201ENSMUST00000184950 187 ntBASIC4.25□□□□□ -1.73
Rfx1P48377 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.25□□□□□ -1.73
Rfx1P48377 Gm6842-201ENSMUST00000211361 390 ntBASIC4.25□□□□□ -1.73
Rfx1P48377 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Rfx1P48377 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
Rfx1P48377 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Rfx1P48377 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Rfx1P48377 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Rfx1P48377 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Rfx1P48377 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Rfx1P48377 Gm12858-201ENSMUST00000121913 208 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm27396-201ENSMUST00000157708 58 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm24750-201ENSMUST00000157843 104 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm25615-201ENSMUST00000177836 94 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm27476-201ENSMUST00000183366 104 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm28500-201ENSMUST00000190286 151 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Mir3068-202ENSMUST00000197755 79 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm5548-201ENSMUST00000055878 397 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm25592-201ENSMUST00000082635 131 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm22973-201ENSMUST00000083298 191 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm22744-201ENSMUST00000083444 65 ntBASIC4.24□□□□□ -1.73
Rfx1P48377 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Rfx1P48377 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Rfx1P48377 AC153887.2-201ENSMUST00000219160 3838 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Rfx1P48377 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Rfx1P48377 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Rfx1P48377 Gm23532-201ENSMUST00000104569 112 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Gm14299-201ENSMUST00000117586 397 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Gm13567-201ENSMUST00000118026 247 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Gm22986-201ENSMUST00000122753 130 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Trav20-201ENSMUST00000142754 347 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Mir7667-201ENSMUST00000183866 63 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC4.23□□□□□ -1.73
Rfx1P48377 AC173482.5-201ENSMUST00000224181 327 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 AC167669.4-201ENSMUST00000225967 140 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Gm43875-201ENSMUST00000203319 2475 ntBASIC4.23□□□□□ -1.73
Rfx1P48377 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Rfx1P48377 Gm24281-201ENSMUST00000104234 136 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Gm23202-201ENSMUST00000104376 129 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Gm5937-201ENSMUST00000119715 643 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Gm23098-201ENSMUST00000157552 299 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Gm24846-201ENSMUST00000158033 108 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Gm22527-201ENSMUST00000158816 106 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Gm23152-201ENSMUST00000175322 116 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Gm27903-201ENSMUST00000175482 126 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Gm22120-201ENSMUST00000175590 70 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Gm27271-201ENSMUST00000183509 170 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC4.22□□□□□ -1.73
Rfx1P48377 Gm28155-201ENSMUST00000191066 151 ntBASIC4.22□□□□□ -1.73
Rfx1P48377 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC4.22□□□□□ -1.73
Rfx1P48377 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Rfx1P48377 Gm14922-201ENSMUST00000121131 163 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 Gm5396-201ENSMUST00000121222 532 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 Gm25783-201ENSMUST00000122525 190 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 Gm25115-201ENSMUST00000157187 140 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 Gm22501-201ENSMUST00000158981 127 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 Gm36964-201ENSMUST00000191876 198 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 Gm37698-201ENSMUST00000192605 463 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 Gm26495-201ENSMUST00000083152 137 ntBASIC4.21□□□□□ -1.74
Rfx1P48377 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Rfx1P48377 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rfx1P48377 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
Rfx1P48377 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Rfx1P48377 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Rfx1P48377 Gm14687-201ENSMUST00000120206 363 ntBASIC4.2□□□□□ -1.74
Rfx1P48377 Gm25386-201ENSMUST00000157814 288 ntBASIC4.2□□□□□ -1.74
Rfx1P48377 Gm4468-201ENSMUST00000170206 294 ntBASIC4.2□□□□□ -1.74
Rfx1P48377 Gm26219-201ENSMUST00000175216 71 ntBASIC4.2□□□□□ -1.74
Rfx1P48377 AC157476.1-201ENSMUST00000215555 169 ntBASIC4.2□□□□□ -1.74
Rfx1P48377 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Rfx1P48377 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
Rfx1P48377 Gm42482-201ENSMUST00000198904 1947 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Rfx1P48377 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Rfx1P48377 Gm24987-201ENSMUST00000104453 134 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm25834-201ENSMUST00000158916 101 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm16326-201ENSMUST00000162843 414 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm28010-201ENSMUST00000179485 126 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm27535-201ENSMUST00000183814 157 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm29167-201ENSMUST00000190024 377 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm37281-201ENSMUST00000192412 439 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 AC154296.1-201ENSMUST00000198150 67 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm43220-201ENSMUST00000199299 282 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm45907-201ENSMUST00000213023 193 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 CT030242.2-201ENSMUST00000221588 148 ntBASIC4.19□□□□□ -1.74
Rfx1P48377 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Rfx1P48377 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 181.4 ms