Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm42506-201ENSMUST00000202009 150 ntBASIC1.2□□□□□ -2.22
Cdx2P43241 Gm31520-201ENSMUST00000203048 733 ntBASIC1.2□□□□□ -2.22
Cdx2P43241 Gm45730-201ENSMUST00000212560 395 ntBASIC1.2□□□□□ -2.22
Cdx2P43241 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.2□□□□□ -2.22
Cdx2P43241 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.2□□□□□ -2.22
Cdx2P43241 Mir211-201ENSMUST00000083651 106 ntBASIC1.2□□□□□ -2.22
Cdx2P43241 Gm26166-201ENSMUST00000083788 107 ntBASIC1.2□□□□□ -2.22
Cdx2P43241 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Cdx2P43241 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.19□□□□□ -2.22
Cdx2P43241 Gm37630-201ENSMUST00000194210 1456 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm12393-201ENSMUST00000117084 848 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm14674-201ENSMUST00000117816 342 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm15211-201ENSMUST00000118932 528 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm14835-201ENSMUST00000119039 315 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm16162-201ENSMUST00000162296 297 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm24333-201ENSMUST00000175101 84 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm23648-201ENSMUST00000180301 107 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Cdx2P43241 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.19□□□□□ -2.22
Cdx2P43241 Gm38154-201ENSMUST00000195444 340 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm45101-201ENSMUST00000208327 232 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm44554-201ENSMUST00000208738 147 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC1.19□□□□□ -2.22
Cdx2P43241 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.19□□□□□ -2.22
Cdx2P43241 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 AC135292.1-201ENSMUST00000227665 204 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Cdx2P43241 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Cdx2P43241 Gm23506-201ENSMUST00000083077 107 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm23102-201ENSMUST00000083724 116 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Olfr575-201ENSMUST00000084812 957 ntBASIC1.19□□□□□ -2.22
Cdx2P43241 Gm3563-201ENSMUST00000172963 1628 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Cdx2P43241 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Cdx2P43241 Gm14359-201ENSMUST00000118883 424 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm6587-201ENSMUST00000120219 613 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm9498-201ENSMUST00000140849 291 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm14368-201ENSMUST00000145305 415 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm26414-201ENSMUST00000157674 269 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm24942-201ENSMUST00000158328 114 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm25715-201ENSMUST00000158627 125 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm23181-201ENSMUST00000158685 110 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm25020-201ENSMUST00000178071 107 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Cdx2P43241 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.18□□□□□ -2.22
Cdx2P43241 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Gm23645-201ENSMUST00000083228 108 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Cdx2P43241 Gm23741-201ENSMUST00000097237 171 ntBASIC1.18□□□□□ -2.22
Cdx2P43241 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Cdx2P43241 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm14852-201ENSMUST00000120065 647 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm22217-201ENSMUST00000157556 313 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm24348-201ENSMUST00000158710 130 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm7953-201ENSMUST00000168278 469 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm25243-201ENSMUST00000174912 207 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm27878-201ENSMUST00000184000 106 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm38149-201ENSMUST00000191943 339 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.17□□□□□ -2.22
Cdx2P43241 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.17□□□□□ -2.22
Cdx2P43241 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Cdx2P43241 AC111046.1-201ENSMUST00000217715 412 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm22575-201ENSMUST00000082981 110 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Mir29c-201ENSMUST00000083614 88 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm25409-201ENSMUST00000083764 131 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Cdx2P43241 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.17□□□□□ -2.22
Cdx2P43241 Gm24342-201ENSMUST00000103907 104 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm24582-201ENSMUST00000103967 103 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm6664-201ENSMUST00000119138 468 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm24630-201ENSMUST00000122768 106 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm23956-201ENSMUST00000157211 119 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm22082-201ENSMUST00000157587 161 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm23387-201ENSMUST00000158586 107 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm2966-201ENSMUST00000166052 481 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Cdx2P43241 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Cdx2P43241 Gm24137-201ENSMUST00000180055 79 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm22391-201ENSMUST00000180356 79 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Mir6985-201ENSMUST00000184641 61 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm42807-201ENSMUST00000200141 329 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Igkv13-82-201ENSMUST00000200308 346 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.16□□□□□ -2.22
Cdx2P43241 Gm44137-201ENSMUST00000203670 367 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.16□□□□□ -2.22
Cdx2P43241 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Cdx2P43241 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Cdx2P43241 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Cdx2P43241 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.15□□□□□ -2.22
Cdx2P43241 Gm2768-201ENSMUST00000121062 250 ntBASIC1.15□□□□□ -2.23
Cdx2P43241 AA413626-201ENSMUST00000121125 494 ntBASIC1.15□□□□□ -2.23
Cdx2P43241 Gm23713-201ENSMUST00000157353 70 ntBASIC1.15□□□□□ -2.23
Cdx2P43241 Gm23538-201ENSMUST00000157535 101 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms